RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 MXRA8Q9BRK3 442 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 ZBED2Q9BTP6 218 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 ANO3Q9BYT9 981 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 SUGCTQ9HAC7 445 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 KCNH7Q9NS40 1196 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 USP25Q9UHP3 1055 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 PAXBP1Q9Y5B6 917 aa9.23□□□□□ -0.93
HDAC6-234ENST00000493923 SMCO2A6NFE2 343 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 SPDYE3A6NKU9 549 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 FAM86B1E9PN63 330 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 UPP2O95045 317 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 REC8O95072 547 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 FAM86B2P0C5J1 330 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 LINC00271P0C7V0 271 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 GHRP10912 638 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 BMP1P13497 986 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 INSRRP14616 1297 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 U2AF2P26368 475 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 ADCY7P51828 1080 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 IGBP1P78318 339 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 MRPS5P82675 430 aaKnown RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 HTRA4P83105 476 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 PPFIA1Q13136 1202 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 MTMR1Q13613 665 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 LPIN1Q14693 890 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 PLCB4Q15147 1175 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 TEX35Q5T0J7 233 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 ZNF397Q8NF99 534 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 RASGRP4Q8TDF6 673 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 DNAJB3Q8WWF6 145 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 ATXN2LQ8WWM7 1075 aaKnown RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 CRYGNQ8WXF5 182 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 SEPT1Q8WYJ6 367 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 BRF1Q92994 677 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 PHKBQ93100 1093 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 JAKMIP1Q96N16 626 aaKnown RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 AGO3Q9H9G7 860 aaKnown RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 NCOA5Q9HCD5 579 aaKnown RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 AGO4Q9HCK5 861 aaKnown RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 BARHL2Q9NY43 387 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 CWC15Q9P013 229 aaKnown RBP9.22□□□□□ -0.93
HDAC6-234ENST00000493923 RAPGEFL1Q9UHV5 662 aa9.22□□□□□ -0.93
HDAC6-234ENST00000493923 C5orf42Q9H799 3197 aa9.21□□□□□ -0.93
HDAC6-234ENST00000493923 IGLV3-22A0A075B6J6 115 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 MBLAC1A4D2B0 266 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 KIF28PB7ZC32 967 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 DDX39AO00148 427 aaKnown RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 MEIS1O00470 390 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 DHX15O43143 795 aaKnown RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 PARNO95453 639 aaKnown RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 ATP4AP20648 1035 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 HSPA4P34932 840 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 SREBF1P36956 1147 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 ACTR2P61160 394 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 TMEM62Q0P6H9 643 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 SKIV2LQ15477 1246 aaKnown RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 NTRK3Q16288 839 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 RTN4RL1Q86UN2 441 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 TXLNBQ8N3L3 684 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 TGS1Q96RS0 853 aaKnown RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 MYCBPQ99417 103 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 FAM49AQ9H0Q0 323 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 EHMT1Q9H9B1 1298 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 JPH1Q9HDC5 661 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 RBM28Q9NW13 759 aaKnown RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 SLC9A2Q9UBY0 812 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 ZNF215Q9UL58 517 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 CDY2AQ9Y6F7 541 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 KIAA1671Q9BY89 1806 aa9.21□□□□□ -0.94
HDAC6-234ENST00000493923 MYH9P35579 1960 aaKnown RBP9.21□□□□□ -0.94
HDAC6-234ENST00000493923 ZBTB42B2RXF5 422 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 TNFRSF10AO00220 468 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 ATG7O95352 703 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 RPS6KB1P23443 525 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 CD52P31358 61 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 METAP2P50579 478 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC6-234ENST00000493923 TOB2Q14106 344 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-234ENST00000493923 PFKFB3Q16875 520 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-234ENST00000493923 CEP55Q53EZ4 464 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 FBXO47Q5MNV8 452 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 PPP1R18Q6NYC8 613 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 SYNE3Q6ZMZ3 975 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 CCDC60Q8IWA6 550 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-234ENST00000493923 HOMEZQ8IX15 550 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 SEPT8Q92599 483 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 GLG1Q92896 1179 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 KHSRPQ92945 711 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC6-234ENST00000493923 GJA10Q969M2 543 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 TOP1MTQ969P6 601 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 UHRF1Q96T88 793 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-234ENST00000493923 AGXT2Q9BYV1 514 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 IFIH1Q9BYX4 1025 aaKnown RBP9.2□□□□□ -0.94
HDAC6-234ENST00000493923 RASSF4Q9H2L5 321 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 CD320Q9NPF0 282 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 TUBE1Q9UJT0 475 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 EMSYQ7Z589 1322 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 NRCAMQ92823 1304 aa9.2□□□□□ -0.94
HDAC6-234ENST00000493923 NID2Q14112 1375 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms