RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 FBXO11Q86XK2 927 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 CCDC170Q8IYT3 715 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 FBXL16Q8N461 479 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
BRCA1-222ENST00000493919 CHST13Q8NET6 341 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 APBA2Q99767 749 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 SEC63Q9UGP8 760 aaKnown RBP12.75□□□□□ -0.37
BRCA1-222ENST00000493919 GJD2Q9UKL4 321 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 HPS5Q9UPZ3 1129 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 FHOD1Q9Y613 1164 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 hCG_1642624A0A1W2PR95 340 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 NFIBO00712 420 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 STRNO43815 780 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 ADCY3O60266 1144 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 CDC27P30260 824 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 RCAN1P53805 252 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 ROR2Q01974 943 aaKnown RBP12.74□□□□□ -0.37
BRCA1-222ENST00000493919 TKFCQ3LXA3 575 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 KRT77Q7Z794 578 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
BRCA1-222ENST00000493919 IL17RAQ96F46 866 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 ALS2CR12Q96Q35 445 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 CORO1BQ9BR76 489 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
BRCA1-222ENST00000493919 CNTNAP5Q8WYK1 1306 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 TBKBP1A7MCY6 615 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
BRCA1-222ENST00000493919 GRK4P32298 578 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 PLA2G4AP47712 749 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 CCL14Q16627 93 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 NDUFAF2Q8N183 169 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 RBM41Q96IZ5 413 aaKnown RBP12.74□□□□□ -0.37
BRCA1-222ENST00000493919 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 NAP1L3Q99457 506 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-222ENST00000493919 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 CCDC68Q9H2F9 335 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 PCSK1NQ9UHG2 260 aa12.74□□□□□ -0.37
BRCA1-222ENST00000493919 PLXNA1Q9UIW2 1896 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 TMEM221A6NGB7 291 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 PPP1R11O60927 126 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-222ENST00000493919 COBLO75128 1261 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 H2AFXP16104 143 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-222ENST00000493919 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
BRCA1-222ENST00000493919 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 FBXO38Q6PIJ6 1188 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 SLC30A9Q6PML9 568 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 LRSAM1Q6UWE0 723 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 ABRAQ8N0Z2 381 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 NPLOC4Q8TAT6 608 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 TRIB2Q92519 343 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 ARGLU1Q9NWB6 273 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-222ENST00000493919 ZNHIT6Q9NWK9 470 aaKnown RBP12.73□□□□□ -0.37
BRCA1-222ENST00000493919 CROTQ9UKG9 612 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 ABCB11O95342 1321 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 NID2Q14112 1375 aa12.73□□□□□ -0.37
BRCA1-222ENST00000493919 PNMA6FA0A0J9YX94 578 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 GOLGA6L9A6NEM1 432 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 PNMA6AP0CW24 399 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-222ENST00000493919 ERCC5P28715 1186 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-222ENST00000493919 SPDYCQ5MJ68 293 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 ISM2Q6H9L7 571 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 SPIRE2Q8WWL2 714 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 USP6NLQ92738 828 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 MTMR8Q96EF0 704 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 OSBPL10Q9BXB5 764 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 RABEP2Q9H5N1 569 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 SLC5A4Q9NY91 659 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 DKK3Q9UBP4 350 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 TPCN1Q9ULQ1 816 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 MAPK8IP1Q9UQF2 711 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 ZNF510Q9Y2H8 683 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
BRCA1-222ENST00000493919 PFASO15067 1338 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 CPLX1O14810 134 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 HMGCRP04035 888 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 INHAP05111 366 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 CALML3P27482 149 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 MAN1A1P33908 653 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 EVCP57679 992 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 SLC30A10Q6XR72 485 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 HEATR3Q7Z4Q2 680 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 FRS2Q8WU20 508 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 TEKT4Q8WW24 435 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 LZICQ8WZA0 190 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 ABHD8Q96I13 439 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 VCX3BQ9H321 246 aa12.72□□□□□ -0.37
BRCA1-222ENST00000493919 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-222ENST00000493919 TFIP11Q9UBB9 837 aaKnown RBP12.72□□□□□ -0.37
BRCA1-222ENST00000493919 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
BRCA1-222ENST00000493919 XRCC5P13010 732 aaKnown RBP12.71□□□□□ -0.37
BRCA1-222ENST00000493919 DESP17661 470 aa12.71□□□□□ -0.37
BRCA1-222ENST00000493919 CCNCP24863 283 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms