RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 TSHZ1Q6ZSZ6 1077 aa25.48■■□□□ 1.67
SNIP1-203ENST00000493916 SLFN12Q8IYM2 578 aa25.48■■□□□ 1.67
SNIP1-203ENST00000493916 FAM184AQ8NB25 1140 aa25.48■■□□□ 1.67
SNIP1-203ENST00000493916 FBXO18Q8NFZ0 1043 aa25.48■■□□□ 1.67
SNIP1-203ENST00000493916 NRBP2Q9NSY0 501 aa25.48■■□□□ 1.67
SNIP1-203ENST00000493916 GJB5O95377 273 aa25.47■■□□□ 1.67
SNIP1-203ENST00000493916 AMHP03971 560 aa25.47■■□□□ 1.67
SNIP1-203ENST00000493916 CA3P07451 260 aa25.47■■□□□ 1.67
SNIP1-203ENST00000493916 MCM2P49736 904 aa25.47■■□□□ 1.67
SNIP1-203ENST00000493916 GUCY1B3Q02153 619 aa25.47■■□□□ 1.67
SNIP1-203ENST00000493916 PPP2R2DQ66LE6 453 aa25.47■■□□□ 1.67
SNIP1-203ENST00000493916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.47■■□□□ 1.67
SNIP1-203ENST00000493916 KIAA0319LQ8IZA0 1049 aa25.47■■□□□ 1.67
SNIP1-203ENST00000493916 USP38Q8NB14 1042 aa25.47■■□□□ 1.67
SNIP1-203ENST00000493916 MAGEB2O15479 319 aa25.46■■□□□ 1.67
SNIP1-203ENST00000493916 TLL1O43897 1013 aa25.46■■□□□ 1.67
SNIP1-203ENST00000493916 CD2BP2O95400 341 aaKnown RBP25.46■■□□□ 1.67
SNIP1-203ENST00000493916 MYLIPQ8WY64 445 aa25.46■■□□□ 1.67
SNIP1-203ENST00000493916 TMX3Q96JJ7 454 aa25.46■■□□□ 1.67
SNIP1-203ENST00000493916 CELF4Q9BZC1 486 aaKnown RBP25.46■■□□□ 1.67
SNIP1-203ENST00000493916 FOXP1Q9H334 677 aaPredicted RBP25.46■■□□□ 1.67
SNIP1-203ENST00000493916 EML1O00423 815 aa25.45■■□□□ 1.66
SNIP1-203ENST00000493916 BAG4O95429 457 aaKnown RBP25.45■■□□□ 1.66
SNIP1-203ENST00000493916 TMEM62Q0P6H9 643 aa25.45■■□□□ 1.66
SNIP1-203ENST00000493916 XKR3Q5GH77 459 aa25.45■■□□□ 1.66
SNIP1-203ENST00000493916 TRMT1LQ7Z2T5 733 aaKnown RBP25.45■■□□□ 1.66
SNIP1-203ENST00000493916 TMCO2Q7Z6W1 182 aaPredicted RBP25.45■■□□□ 1.66
SNIP1-203ENST00000493916 NIFKQ9BYG3 293 aaKnown RBP25.45■■□□□ 1.66
SNIP1-203ENST00000493916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.44■■□□□ 1.66
SNIP1-203ENST00000493916 MARCH6O60337 910 aa25.44■■□□□ 1.66
SNIP1-203ENST00000493916 NEMFO60524 1076 aa25.44■■□□□ 1.66
SNIP1-203ENST00000493916 PSMC5P62195 406 aa25.44■■□□□ 1.66
SNIP1-203ENST00000493916 SPIRE1Q08AE8 756 aa25.44■■□□□ 1.66
SNIP1-203ENST00000493916 TARBP2Q15633 366 aaKnown RBP25.44■■□□□ 1.66
SNIP1-203ENST00000493916 LINC01465Q8N7H1 131 aa25.44■■□□□ 1.66
SNIP1-203ENST00000493916 RAD9AQ99638 391 aa25.44■■□□□ 1.66
SNIP1-203ENST00000493916 ZBED2Q9BTP6 218 aa25.44■■□□□ 1.66
SNIP1-203ENST00000493916 BACH2Q9BYV9 841 aa25.44■■□□□ 1.66
SNIP1-203ENST00000493916 WNT7AO00755 349 aa25.43■■□□□ 1.66
SNIP1-203ENST00000493916 STBD1O95210 358 aa25.43■■□□□ 1.66
SNIP1-203ENST00000493916 FOSL2P15408 326 aa25.43■■□□□ 1.66
SNIP1-203ENST00000493916 CALCRLQ16602 461 aa25.43■■□□□ 1.66
SNIP1-203ENST00000493916 MYOCDQ8IZQ8 938 aa25.43■■□□□ 1.66
SNIP1-203ENST00000493916 BANK1Q8NDB2 785 aa25.43■■□□□ 1.66
SNIP1-203ENST00000493916 AGO3Q9H9G7 860 aaKnown RBP25.43■■□□□ 1.66
SNIP1-203ENST00000493916 SEPT9Q9UHD8 586 aaPredicted RBP25.43■■□□□ 1.66
SNIP1-203ENST00000493916 TRANK1O15050 2925 aa25.42■■□□□ 1.66
SNIP1-203ENST00000493916 QARSP47897 775 aaKnown RBP25.42■■□□□ 1.66
SNIP1-203ENST00000493916 FAM43BQ6ZT52 329 aaPredicted RBP25.42■■□□□ 1.66
SNIP1-203ENST00000493916 METTL13Q8N6R0 699 aa25.42■■□□□ 1.66
SNIP1-203ENST00000493916 PRDM12Q9H4Q4 367 aa25.42■■□□□ 1.66
SNIP1-203ENST00000493916 KIF3AQ9Y496 699 aa25.42■■□□□ 1.66
SNIP1-203ENST00000493916 EYSQ5T1H1 3165 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 DKC1O60832 514 aaKnown RBP eCLIP25.41■■□□□ 1.66
SNIP1-203ENST00000493916 P4HBP07237 508 aaKnown RBP25.41■■□□□ 1.66
SNIP1-203ENST00000493916 TMOD1P28289 359 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 CD52P31358 61 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 CLCN3P51790 818 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 TAP1Q03518 808 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 EPHA7Q15375 998 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 EFCAB12Q6NXP0 572 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 NOSTRINQ8IVI9 506 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 ZNF710Q8N1W2 664 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 TOP1MTQ969P6 601 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 MTMR9Q96QG7 549 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 CEP89Q96ST8 783 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 COL4A6Q14031 1691 aa25.41■■□□□ 1.66
SNIP1-203ENST00000493916 LCHNA4D1U4 455 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 ARHGEF15O94989 841 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 HTRA4P83105 476 aaPredicted RBP25.4■■□□□ 1.66
SNIP1-203ENST00000493916 TBC1D8BQ0IIM8 1120 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 PAK2Q13177 524 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 ORC2Q13416 577 aaPredicted RBP25.4■■□□□ 1.66
SNIP1-203ENST00000493916 NCAPH2Q6IBW4 605 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 MAP7D2Q96T17 732 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 GAS2L1Q99501 681 aaPredicted RBP25.4■■□□□ 1.66
SNIP1-203ENST00000493916 FTHL17Q9BXU8 183 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 PADI3Q9ULW8 664 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 INSL6Q9Y581 213 aa25.4■■□□□ 1.66
SNIP1-203ENST00000493916 GPR32O75388 356 aa25.39■■□□□ 1.66
SNIP1-203ENST00000493916 CRYBB1P53674 252 aaPredicted RBP25.39■■□□□ 1.66
SNIP1-203ENST00000493916 MTERF2Q49AM1 385 aa25.39■■□□□ 1.66
SNIP1-203ENST00000493916 FAM117BQ6P1L5 589 aa25.39■■□□□ 1.66
SNIP1-203ENST00000493916 ANO5Q75V66 913 aa25.39■■□□□ 1.66
SNIP1-203ENST00000493916 LRRC71Q8N4P6 559 aa25.39■■□□□ 1.66
SNIP1-203ENST00000493916 PCDHA12Q9UN75 941 aa25.39■■□□□ 1.66
SNIP1-203ENST00000493916 IGKV6-21A0A0C4DH24 114 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 TMEM150BA6NC51 233 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 DDX11L8A8MPP1 907 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 VTNP04004 478 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 U2AF2P26368 475 aaKnown RBP eCLIP25.38■■□□□ 1.65
SNIP1-203ENST00000493916 TRAPPC10P48553 1259 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 GNL2Q13823 731 aaKnown RBP25.38■■□□□ 1.65
SNIP1-203ENST00000493916 KIZQ2M2Z5 673 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 C4orf19Q8IY42 314 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 MAFAQ8NHW3 353 aaPredicted RBP25.38■■□□□ 1.65
SNIP1-203ENST00000493916 SP7Q8TDD2 431 aaPredicted RBP25.38■■□□□ 1.65
SNIP1-203ENST00000493916 LINC01599Q8WXQ3 324 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 LXNQ9BS40 222 aa25.38■■□□□ 1.65
SNIP1-203ENST00000493916 TTC12Q9H892 705 aaPredicted RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms