RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 DSEQ9UL01 958 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 GTF2A1LQ9UNN4 478 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 ATP23Q9Y6H3 246 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 TMEM82A0PJX8 343 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 RBAK-RBAKDNI3L0D1 243 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 GOLIM4O00461 696 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 KRIT1O00522 736 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 NKRFO15226 690 aaKnown RBP eCLIP5.49□□□□□ -1.53
GTF3A-208ENST00000493903 MAFKO60675 156 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 FKTNO75072 461 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 COBLO75128 1261 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 COL6A2P12110 1019 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 PDCP20941 246 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 CLCN7P51798 805 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 SLC16A1P53985 500 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 MANFP55145 182 aaKnown RBP5.49□□□□□ -1.53
GTF3A-208ENST00000493903 IFIT5Q13325 482 aaKnown RBP5.49□□□□□ -1.53
GTF3A-208ENST00000493903 SEMA5AQ13591 1074 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 MAPRE1Q15691 268 aaKnown RBP5.49□□□□□ -1.53
GTF3A-208ENST00000493903 ALFQ53S48 1182 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 TOR2AQ5JU69 321 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 CCDC70Q6NSX1 233 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 XRRA1Q6P2D8 792 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 CCDC149Q6ZUS6 474 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 PCGF5Q86SE9 256 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 SAPCD2Q86UD0 394 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 KIAA0319LQ8IZA0 1049 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 KRT78Q8N1N4 520 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 NME8Q8N427 588 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.49□□□□□ -1.53
GTF3A-208ENST00000493903 NLGN2Q8NFZ4 835 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.49□□□□□ -1.53
GTF3A-208ENST00000493903 SGCZQ96LD1 299 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 CCDC138Q96M89 665 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 SCLT1Q96NL6 688 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 LRRC4CQ9HCJ2 640 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 ZFP64Q9NPA5 681 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 PCMTD2Q9NV79 361 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 ERVK13-1Q9NX77 482 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 DUSP13Q9UII6 198 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 LZTS1Q9Y250 596 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 ZNF281Q9Y2X9 895 aa5.49□□□□□ -1.53
GTF3A-208ENST00000493903 C22orf46C9J442 243 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 KCNK3O14649 394 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 CYP26A1O43174 497 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 PQBP1O60828 265 aaKnown RBP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 COL6A1P12109 1028 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 FOSL1P15407 271 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 FPR2P25090 351 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 LTKP29376 864 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 ECE1P42892 770 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 CACNB3P54284 484 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 EPHA5P54756 1037 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 CORO7P57737 925 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 KIF23Q02241 960 aaPredicted RBP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 CHRNA2Q15822 529 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 CPSF6Q16630 551 aaKnown RBP eCLIP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 NKPD1Q17RQ9 610 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 KIAA0753Q2KHM9 967 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 ANO4Q32M45 955 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 MBNL2Q5VZF2 373 aaKnown RBP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 DUSP27Q5VZP5 1158 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 ZNF354CQ86Y25 554 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 MYLK4Q86YV6 388 aaPredicted RBP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 PHYKPLQ8IUZ5 450 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 THEMISQ8N1K5 641 aaPredicted RBP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 CAMKK1Q8N5S9 505 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 TEX19Q8NA77 164 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 TMEM52Q8NDY8 209 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 DEPTORQ8TB45 409 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 RTF1Q92541 710 aaKnown RBP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 COA7Q96BR5 231 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 PDGFDQ9GZP0 370 aaPredicted RBP5.48□□□□□ -1.53
GTF3A-208ENST00000493903 BTG4Q9NY30 223 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 ZSWIM5Q9P217 1185 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 SWAP70Q9UH65 585 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 TUBD1Q9UJT1 453 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 L1RE1Q9UN81 338 aa5.48□□□□□ -1.53
GTF3A-208ENST00000493903 LCHNA4D1U4 455 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 KIAA1324LA8MWY0 1029 aaPredicted RBP5.47□□□□□ -1.53
GTF3A-208ENST00000493903 F5H423 210 aaPredicted RBP5.47□□□□□ -1.53
GTF3A-208ENST00000493903 B3GALT2O43825 422 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 PIP5K1CO60331 668 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 UBXN7O94888 489 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 OSMP13725 252 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 IL12RB1P42701 662 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 SARSP49591 514 aaKnown RBP5.47□□□□□ -1.53
GTF3A-208ENST00000493903 AGFG1P52594 562 aaKnown RBP5.47□□□□□ -1.53
GTF3A-208ENST00000493903 OXCT1P55809 520 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 TEKQ02763 1124 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 TMEM132BQ14DG7 1078 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 LLGL1Q15334 1064 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 PGS1Q32NB8 556 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 UAP1L1Q3KQV9 507 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 HSF5Q4G112 596 aaPredicted RBP5.47□□□□□ -1.53
GTF3A-208ENST00000493903 CT83Q5H943 113 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 EMC4Q5J8M3 183 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 CDKAL1Q5VV42 579 aa5.47□□□□□ -1.53
GTF3A-208ENST00000493903 CPZQ66K79 652 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms