RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 RBM46Q8TBY0 533 aaKnown RBP11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 TMEM174Q8WUU8 243 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 FBXL5Q9UKA1 691 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 V9GYY5 206 aaPredicted RBP11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 TGFB1I1O43294 461 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 STAM2O75886 525 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 SERPING1P05155 500 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 H2AFXP16104 143 aaPredicted RBP11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 KIF11P52732 1056 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 HMGCS2P54868 508 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 SFMBT2Q5VUG0 894 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 NSMFQ6X4W1 530 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 RSRC2Q7L4I2 434 aaKnown RBP11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 SRGAP1Q7Z6B7 1085 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 NLRX1Q86UT6 975 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 LRRN4CLQ8ND94 238 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 GOLGA1Q92805 767 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 SENP7Q9BQF6 1050 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 STRA6Q9BX79 667 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 DEF6Q9H4E7 631 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 LARSQ9P2J5 1176 aaKnown RBP11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 ZNF214Q9UL59 606 aaPredicted RBP11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 GUCA1BQ9UMX6 200 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 ANO9A1A5B4 782 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 WDR64B1ANS9 1081 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 PPP1R37O75864 691 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 AKAP3O75969 853 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 PSMC2P35998 433 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 MAPK7Q13164 816 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ODR4Q5SWX8 454 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 VSIG10LQ86VR7 867 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 SLC9A9Q8IVB4 645 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 SLC17A8Q8NDX2 589 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 RABGGTAQ92696 567 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ZFP91Q96JP5 570 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 TEX13BQ9BXU2 312 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 GANQ9H2C0 597 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ARGLU1Q9NWB6 273 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 HOXC10Q9NYD6 342 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 DAAM1Q9Y4D1 1078 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 RBAK-RBAKDNI3L0D1 243 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 DDX39AO00148 427 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 HIP1RO75146 1068 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 NMT1P30419 496 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 EIF4A3P38919 411 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 RARRES1P49788 294 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 PSMC5P62195 406 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ASTE1Q2TB18 679 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ZNF746Q6NUN9 644 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 GPR161Q8N6U8 529 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 CDHR1Q96JP9 859 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 GBP3Q9H0R5 595 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 LUC7LQ9NQ29 371 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ANKEF1Q9NU02 776 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 AIPL1Q9NZN9 384 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 AFG3L2Q9Y4W6 797 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 LOC285556D6RIA3 1793 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ZBTB39O15060 712 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 AKR1B10O60218 316 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ABL1P00519 1130 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 SNRPFP62306 86 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 AMPD2Q01433 879 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 BAATQ14032 418 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 CCDC155Q8N6L0 562 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 BORCS6Q96GS4 357 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 IFIH1Q9BYX4 1025 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 ACAD9Q9H845 621 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 DMAC2Q9NW81 257 aa11.85□□□□□ -0.51
PHACTR4-204ENST00000493669 COL11A1P12107 1806 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 SFI1A8K8P3 1242 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 PJA2O43164 708 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 MYCLP12524 364 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 ANXA13P27216 316 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 POLR2FP61218 127 aaKnown RBP11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 HGSNATQ68CP4 663 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 FBXO38Q6PIJ6 1188 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 SLC35C1Q96A29 364 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 INPP4AQ96PE3 977 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 TMEM206Q9H813 350 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 PCDHA13Q9Y5I0 950 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 NR3C2P08235 984 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 EXOC3L4Q17RC7 722 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 PAPD7Q5XG87 772 aaKnown RBP11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 GBP6Q6ZN66 633 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 FAM186BQ8IYM0 893 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 DAW1Q8N136 415 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 SECISBP2LQ93073 1101 aaKnown RBP11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 WNK4Q96J92 1243 aa11.84□□□□□ -0.51
PHACTR4-204ENST00000493669 DRC1Q96MC2 740 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms