RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ZNF280CQ8ND82 737 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 PIGOQ8TEQ8 1089 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 NEK1Q96PY6 1258 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 KRT23Q9C075 422 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 CLIC5Q9NZA1 410 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 MYH6P13533 1939 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PALLDQ8WX93 1383 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PI4KAP2A4QPH2 592 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 IFIT3O14879 490 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 ZPR1O75312 459 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 ADAMTS2O95450 1211 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 ASMTLO95671 621 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 EEF2P13639 858 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 ALADP13716 330 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 BDNFP23560 247 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PCYT1AP49585 367 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 GEMIN4P57678 1058 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 BYSLQ13895 437 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 SYDE2Q5VT97 1194 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 KAZNQ674X7 775 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 INTS8Q75QN2 995 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PHLDB2Q86SQ0 1253 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 LRRC34Q8IZ02 419 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PI4KAP1Q8N8J0 262 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 SPATA4Q8NEY3 305 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 RAPGEF4Q8WZA2 1011 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 MAELQ96JY0 434 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PCMTD1Q96MG8 357 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 METTL5Q9NRN9 209 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 DBF4Q9UBU7 674 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 SATB2Q9UPW6 733 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 LZTS1Q9Y250 596 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 SURF6O75683 361 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 OXSR1O95747 527 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 BAG3O95817 575 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 SHBGP04278 402 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 RASSF7Q02833 373 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 TEFQ10587 303 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 LIN52Q52LA3 116 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PIAS4Q8N2W9 510 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 RBM46Q8TBY0 533 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 IQCDQ96DY2 449 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 EPSTI1Q96J88 318 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 CCDC42Q96M95 316 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 TM6SF1Q9BZW5 370 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PARVBQ9HBI1 364 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 TMBIM4Q9HC24 238 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PRDM11Q9NQV5 511 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 INTS9Q9NV88 658 aaKnown RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 C6orf203Q9P0P8 240 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-205ENST00000493587 TRIM17Q9Y577 477 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PCDH11XQ9BZA7 1347 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 PCDH11YQ9BZA8 1340 aa7.41□□□□□ -1.22
VPS13B-205ENST00000493587 FOXP2O15409 715 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 PORP16435 677 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 VHLP40337 213 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 DCTN2Q13561 401 aaKnown RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 ZCWPW2Q504Y3 356 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 IQCKQ8N0W5 287 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 DCLK2Q8N568 766 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 PAF1Q8N7H5 531 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 SYT2Q8N9I0 419 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 MGARPQ8TDB4 240 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 STMN2Q93045 179 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 CAVIN3Q969G5 261 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 HSPBAP1Q96EW2 488 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 SUCLG2Q96I99 432 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 TIPINQ9BVW5 301 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 HSD3B7Q9H2F3 369 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 PALMDQ9NP74 551 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 NMRK1Q9NWW6 199 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 EHD2Q9NZN4 543 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 PCDHA5Q9Y5H7 936 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 ZSCAN5CA6NGD5 496 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 TEX28O15482 410 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 MAP3K7O43318 606 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 DNAJC6O75061 913 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 NDUFA10O95299 355 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 MSL3P1P0C860 447 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 DDX5P17844 614 aaKnown RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 EIF2B2P49770 351 aaKnown RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 KRT83P78385 493 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 BIRC3Q13489 604 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 ITIH4Q14624 930 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 TMEM259Q4ZIN3 620 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 ZC2HC1CQ53FD0 456 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 OTUD7BQ6GQQ9 843 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 PPP1R42Q7Z4L9 355 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 PATL1Q86TB9 770 aaKnown RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 MYO1HQ8N1T3 1032 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 SCAIQ8N9R8 606 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 GDAP1Q8TB36 358 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 LRRC45Q96CN5 670 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 DHTKD1Q96HY7 919 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-205ENST00000493587 SLC4A9Q96Q91 983 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 TRPC7Q9HCX4 862 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 CNGB3Q9NQW8 809 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 PPP1R9AQ9ULJ8 1098 aa7.4□□□□□ -1.22
VPS13B-205ENST00000493587 CLIC4Q9Y696 253 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms