RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 ARHGEF35A5YM69 484 aa17.58■□□□□ 0.4
HPS4-216ENST00000493455 HAS3O00219 553 aa17.58■□□□□ 0.4
HPS4-216ENST00000493455 POLR2DO15514 142 aaKnown RBP17.58■□□□□ 0.4
HPS4-216ENST00000493455 NDUFA8P51970 172 aa17.58■□□□□ 0.4
HPS4-216ENST00000493455 NECAB2Q7Z6G3 386 aa17.58■□□□□ 0.4
HPS4-216ENST00000493455 BHMT2Q9H2M3 363 aa17.58■□□□□ 0.4
HPS4-216ENST00000493455 GRIN2DO15399 1336 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 USO1O60763 962 aaKnown RBP17.57■□□□□ 0.4
HPS4-216ENST00000493455 STBD1O95210 358 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 SYKP43405 635 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 ZNF200P98182 395 aaPredicted RBP17.57■□□□□ 0.4
HPS4-216ENST00000493455 MCM6Q14566 821 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 HYIQ5T013 277 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 LRRC15Q8TF66 581 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 LMBR1Q8WVP7 490 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 RAD54LQ92698 747 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 CYP26B1Q9NR63 512 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 NOD1Q9Y239 953 aa17.57■□□□□ 0.4
HPS4-216ENST00000493455 SLC26A4O43511 780 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 PQBP1O60828 265 aaKnown RBP17.56■□□□□ 0.4
HPS4-216ENST00000493455 LYPLA2O95372 231 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 EYA4O95677 639 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 PLA2G4BP0C869 781 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 MUTP22033 750 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 UBE2HP62256 183 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 TBC1D8BQ0IIM8 1120 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 ZNF484Q5JVG2 852 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 GDF6Q6KF10 455 aaPredicted RBP17.56■□□□□ 0.4
HPS4-216ENST00000493455 MAEAQ7L5Y9 396 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 LARP4BQ92615 738 aaKnown RBP17.56■□□□□ 0.4
HPS4-216ENST00000493455 STAMQ92783 540 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 ANKEF1Q9NU02 776 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 LMBRD1Q9NUN5 540 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 SERTAD1Q9UHV2 236 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 ATP11BQ9Y2G3 1177 aa17.56■□□□□ 0.4
HPS4-216ENST00000493455 ARVCFO00192 962 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 LIG1P18858 919 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 RARRES1P49788 294 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 POLGP54098 1239 aaPredicted RBP17.55■□□□□ 0.4
HPS4-216ENST00000493455 RAD51AP2Q09MP3 1159 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 HIC1Q14526 733 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 NFRKBQ6P4R8 1299 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 SLC39A5Q6ZMH5 540 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 CEP57L1Q8IYX8 460 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 METTL13Q8N6R0 699 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 IQUBQ8NA54 791 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 NIFKQ9BYG3 293 aaKnown RBP17.55■□□□□ 0.4
HPS4-216ENST00000493455 SUGCTQ9HAC7 445 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 BLOC1S4Q9NUP1 217 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 TRMT13Q9NUP7 481 aaKnown RBP17.55■□□□□ 0.4
HPS4-216ENST00000493455 STK17AQ9UEE5 414 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 GTF2IRD1Q9UHL9 959 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 TUBE1Q9UJT0 475 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 DBR1Q9UK59 544 aaKnown RBP17.55■□□□□ 0.4
HPS4-216ENST00000493455 MYH11P35749 1972 aa17.55■□□□□ 0.4
HPS4-216ENST00000493455 COL1A2P08123 1366 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 NRCAMQ92823 1304 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 RRN3P2A6NIE6 340 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 TREHO43280 583 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 KRT18P05783 430 aaKnown RBP17.54■□□□□ 0.4
HPS4-216ENST00000493455 COL6A1P12109 1028 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 KLRC1P26715 233 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 MCM4P33991 863 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 AFMP43652 599 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
HPS4-216ENST00000493455 PTGISQ16647 500 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 TRIM60Q495X7 471 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 PADI6Q6TGC4 694 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 GPBP1Q86WP2 473 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 LRRC71Q8N4P6 559 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 FAM49AQ9H0Q0 323 aaPredicted RBP17.54■□□□□ 0.4
HPS4-216ENST00000493455 TRPV6Q9H1D0 765 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 POLD4Q9HCU8 107 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 HPSEQ9Y251 543 aa17.54■□□□□ 0.4
HPS4-216ENST00000493455 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 ZBTB42B2RXF5 422 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 ZNF202O95125 648 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 GNAT1P11488 350 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 CYP2C9P11712 490 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 CAPN2P17655 700 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 CLCN3P51790 818 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 RTP1P59025 263 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 FAM160A1Q05DH4 1040 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 EMC2Q15006 297 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 E2F4Q16254 413 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 NAALADL2Q58DX5 795 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 MTHFD1LQ6UB35 978 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 SV2BQ7L1I2 683 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 GRAMD1CQ8IYS0 662 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 SLC7A3Q8WY07 619 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 PPP1R16BQ96T49 567 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 PYM1Q9BRP8 204 aaKnown RBP17.53■□□□□ 0.4
HPS4-216ENST00000493455 RUSC1Q9BVN2 902 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 ATP6V0A4Q9HBG4 840 aa17.53■□□□□ 0.4
HPS4-216ENST00000493455 TLR3O15455 904 aaKnown RBP17.52■□□□□ 0.4
HPS4-216ENST00000493455 B4GALT4O60513 344 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 NR1I2O75469 434 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 C22orf31O95567 290 aa17.52■□□□□ 0.4
HPS4-216ENST00000493455 XRCC6P12956 609 aaKnown RBP eCLIP17.52■□□□□ 0.4
HPS4-216ENST00000493455 TARBP2Q15633 366 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms