RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 TFRCP02786 760 aaKnown RBP7.77□□□□□ -1.17
HERC4-211ENST00000492996 GYS2P54840 703 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 AMPD3Q01432 767 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 ZNF569Q5MCW4 686 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 ICE2Q659A1 982 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 KIAA0895Q8NCT3 520 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 TUBGCP2Q9BSJ2 902 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 TFR2Q9UP52 801 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 POTEFA5A3E0 1075 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 TCP10L2B9ZVM9 353 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 F5H6K3 240 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 GH2P01242 217 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 CCDC172P0C7W6 258 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 CCNE1P24864 410 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 JAG1P78504 1218 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 KLRC3Q07444 240 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 TBC1D8BQ0IIM8 1120 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 SYCP1Q15431 976 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 CDC37Q16543 378 aaPredicted RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 ECM1Q16610 540 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 TEX35Q5T0J7 233 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 SP7Q8TDD2 431 aaPredicted RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 HERVK_113Q902F9 699 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 CNOT6LQ96LI5 555 aaKnown RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 ZHX3Q9H4I2 956 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 PCDHA12Q9UN75 941 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 SCAF8Q9UPN6 1271 aaKnown RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 CARNS1A5YM72 827 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 GOLGA6L9A6NEM1 432 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 LGALS16A8MUM7 142 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 SEPT4O43236 478 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 TRIM21P19474 475 aaKnown RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 STAT3P40763 770 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 ABCB5Q2M3G0 1257 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 HAS1Q92839 578 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 C7orf25Q9BPX7 421 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 RAB34Q9BZG1 259 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 CUEDC2Q9H467 287 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 KANSL2Q9H9L4 492 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 PPP1R9AQ9ULJ8 1098 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 LUC7L2Q9Y383 392 aaKnown RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 hCG_1984214I3L0E3 225 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 KIF5CO60282 957 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 CXCL10P02778 98 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 ZYXQ15942 572 aaKnown RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 GPR142Q7Z601 462 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 ZNF713Q8N859 430 aaPredicted RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 ZNF397Q8NF99 534 aaPredicted RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 DDX12PQ92771 950 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 DHTKD1Q96HY7 919 aaPredicted RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 NOC4LQ9BVI4 516 aaKnown RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 SEMA6BQ9H3T3 888 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 DEF6Q9H4E7 631 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 POLD4Q9HCU8 107 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 AGPAT5Q9NUQ2 364 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 TRIM10Q9UDY6 481 aa7.76□□□□□ -1.17
HERC4-211ENST00000492996 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.76□□□□□ -1.17
HERC4-211ENST00000492996 PDCD11Q14690 1871 aaKnown RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 E9PMD0 336 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 TUBB4AP04350 444 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 INHAP05111 366 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 MYL1P05976 194 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 HOXA13P31271 388 aaPredicted RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 INPP5BP32019 993 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 TSR1Q2NL82 804 aaKnown RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 CNNM4Q6P4Q7 775 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 SLC30A10Q6XR72 485 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 TMTC1Q8IUR5 882 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 DNERQ8NFT8 737 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.75□□□□□ -1.17
HERC4-211ENST00000492996 SLC38A10Q9HBR0 1119 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 PUF60Q9UHX1 559 aaKnown RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 DDX41Q9UJV9 622 aaKnown RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 GUCA1BQ9UMX6 200 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 KIAA1024Q9UPX6 916 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 NPHP3-ACAD11A0A0J9YXS1 232 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 NDUFB10O96000 172 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 EEF1GP26641 437 aaKnown RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 FXR2P51116 673 aaKnown RBP eCLIP7.75□□□□□ -1.17
HERC4-211ENST00000492996 PRR16Q569H4 304 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 CYP26C1Q6V0L0 522 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 NECAB2Q7Z6G3 386 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 EGFL6Q8IUX8 553 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 MICALL1Q8N3F8 863 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 U2AF1L4Q8WU68 220 aaKnown RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 TMEM106CQ9BVX2 250 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 NAA15Q9BXJ9 866 aaKnown RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 THAP9Q9H5L6 903 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 VTA1Q9NP79 307 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 ZNF214Q9UL59 606 aaPredicted RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 GNEQ9Y223 722 aaKnown RBP7.75□□□□□ -1.17
HERC4-211ENST00000492996 ITIH6Q6UXX5 1313 aa7.75□□□□□ -1.17
HERC4-211ENST00000492996 BICDL2A1A5D9 508 aa7.74□□□□□ -1.17
HERC4-211ENST00000492996 ADCY3O60266 1144 aa7.74□□□□□ -1.17
HERC4-211ENST00000492996 BAIAP3O94812 1187 aa7.74□□□□□ -1.17
HERC4-211ENST00000492996 PPP2R3AQ06190 1150 aa7.74□□□□□ -1.17
HERC4-211ENST00000492996 MOB2Q70IA6 237 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms