RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 PLA2G4AP47712 749 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 GIPRP48546 466 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 COPAP53621 1224 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 RPS8P62241 208 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 DYNLL1P63167 89 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 AKAP17AQ02040 695 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 GRIN1Q05586 938 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TROAPQ12815 778 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 PPP2R5CQ13362 524 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 PNOCQ13519 176 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 STAT4Q14765 748 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 POSTNQ15063 836 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 E2F5Q15329 346 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 PTPN14Q15678 1187 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 NPY5RQ15761 445 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CCDC85BQ15834 202 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 PTPN21Q16825 1174 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ZC3H12BQ5HYM0 836 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 IFIT1BQ5T764 474 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 SYDE2Q5VT97 1194 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 KIAA0319Q5VV43 1072 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CEP135Q66GS9 1140 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TBC1D9BQ66K14 1250 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ARMCX5Q6P1M9 558 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CTR9Q6PD62 1173 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 IGF2-ASQ6U949 168 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 OLFM4Q6UX06 510 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 C4orf50Q6ZRC1 276 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TMTC3Q6ZXV5 915 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TMC6Q7Z403 805 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CATIPQ7Z7H3 387 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TBC1D1Q86TI0 1168 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 LRRTM3Q86VH5 581 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 PACS2Q86VP3 889 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 FCHSD1Q86WN1 690 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 IQCA1Q86XH1 822 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 SPATS2Q86XZ4 545 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 VSTM4Q8IW00 320 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CNTD1Q8N815 330 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 MLKLQ8NB16 471 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CNNM3Q8NE01 707 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CCDC112Q8NEF3 446 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ARMC2Q8NEN0 867 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ST13P5Q8NFI4 369 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 SDR42E1Q8WUS8 393 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ZFPM2Q8WW38 1151 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 IPCEF1Q8WWN9 437 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ANKS1AQ92625 1134 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 GPKOWQ92917 476 aaPredicted RBP eCLIP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 FERMT2Q96AC1 680 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 SH3KBP1Q96B97 665 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 NSUN4Q96CB9 384 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 THAP11Q96EK4 314 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 VMP1Q96GC9 406 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 LRGUKQ96M69 825 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 C16orf45Q96MC5 204 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ZMAT2Q96NC0 199 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 SPAG5Q96R06 1193 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 FERD3LQ96RJ6 166 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ZSCAN10Q96SZ4 725 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ZKSCAN3Q9BRR0 538 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CCDC94Q9BW85 323 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 SPATA9Q9BWV2 254 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CRNKL1Q9BZJ0 848 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ANKRD2Q9GZV1 360 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TSPAN10Q9H1Z9 355 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 SMYD2Q9NRG4 433 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TOMM22Q9NS69 142 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ATP8A2Q9NTI2 1148 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 RRN3Q9NYV6 651 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 ARHGAP28Q9P2N2 729 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 DACH1Q9UI36 760 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TSR3Q9UJK0 312 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 PPP1R9AQ9ULJ8 1098 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 KCNJ14Q9UNX9 436 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 TMX2Q9Y320 296 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 PCDHB6Q9Y5E3 794 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 IKBKGQ9Y6K9 419 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 MYH14Q7Z406 1995 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 COL4A1P02462 1669 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 CNTNAP5Q8WYK1 1306 aa4.19□□□□□ -1.74
ATPAF1-206ENST00000492233 PHLPP1O60346 1717 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 CACNA1SQ13698 1873 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 A0A0G2JS52 829 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 WTIPA6NIX2 430 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 USP27XA6NNY8 438 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 B2RBV5 119 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SMIM22K7EJ46 135 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 IPO5O00410 1097 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 BACH1O14867 736 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 FOXN1O15353 648 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 POLR2DO15514 142 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 DDX3YO15523 660 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 GREM1O60565 184 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 FBXO21O94952 628 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SNUPNO95149 360 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 PLEKHA8P1O95397 391 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 CNOT4O95628 575 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SLFN14P0C7P3 912 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ARAFP10398 606 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms