RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 STK36Q9NRP7 1315 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 IGSF9BQ9UPX0 1349 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 MSH4O15457 936 aa18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 CRYBB1P53674 252 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 EPC2Q52LR7 807 aa18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 EXOC8Q8IYI6 725 aa18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 SLC5A5Q92911 643 aa18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 PPP2R3CQ969Q6 453 aa18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 JPH2Q9BR39 696 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 PRDM6Q9NQX0 595 aa18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 DDX25Q9UHL0 483 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 AKT3Q9Y243 479 aa18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 PCDHB7Q9Y5E2 793 aa18.67■□□□□ 0.58
PDLIM2-217ENST00000491330 CYP3A7-CYP3A51PA0A087WV96 503 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 NCK2O43639 380 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 OATP04181 439 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 CYP3A7P24462 503 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 CTNNB1P35222 781 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 TBC1D8BQ0IIM8 1120 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 SCRN1Q12765 414 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 MKRN4PQ13434 485 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 LETM2Q2VYF4 491 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 NEK8Q86SG6 692 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 MRPL38Q96DV4 380 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 FAM20AQ96MK3 541 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 C17orf80Q9BSJ5 609 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 AAASQ9NRG9 546 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 ORC3Q9UBD5 711 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 ADGRA3Q8IWK6 1321 aa18.66■□□□□ 0.58
PDLIM2-217ENST00000491330 EPOPA6NHQ4 379 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 H3BNC9 293 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 TNFRSF10AO00220 468 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 ARHGEF15O94989 841 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 ZSCAN20P17040 1043 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 NEK4P51957 841 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 XKR3Q5GH77 459 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 EFCAB12Q6NXP0 572 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 KIAA0319LQ8IZA0 1049 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 PLVAPQ9BX97 442 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 LMAN2LQ9H0V9 348 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 TPCN1Q9ULQ1 816 aa18.65■□□□□ 0.58
PDLIM2-217ENST00000491330 C22orf31O95567 290 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 BMPR1AP36894 532 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 AK2P54819 239 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 PRKCEQ02156 737 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 INF2Q27J81 1249 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 NAALADL2Q58DX5 795 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 SPOUT1Q5T280 376 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 CMTR2Q8IYT2 770 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 ADAMTS19Q8TE59 1207 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 LENG9Q96B70 501 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 ZBTB10Q96DT7 871 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 UHRF1Q96T88 793 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 PHF20Q9BVI0 1012 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 AGO3Q9H9G7 860 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 FAM50BQ9Y247 325 aa18.64■□□□□ 0.57
PDLIM2-217ENST00000491330 KAT6AQ92794 2004 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 HOXA2O43364 376 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 CCNT1O60563 726 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 LPXNO60711 386 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 DGKIO75912 1065 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 IBSPP21815 317 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 KRT2P35908 639 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 SAFBQ15424 915 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 KIZQ2M2Z5 673 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 PPP4R3AQ6IN85 833 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 SLC24A5Q71RS6 500 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 SLFN12Q8IYM2 578 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 BANK1Q8NDB2 785 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 TET1Q8NFU7 2136 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 INO80BQ9C086 356 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 UNC45AQ9H3U1 944 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 SEPT9Q9UHD8 586 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 KCNJ14Q9UNX9 436 aa18.63■□□□□ 0.57
PDLIM2-217ENST00000491330 TBX3O15119 743 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 PSMD10O75832 226 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 TDP2O95551 362 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 ATP4AP20648 1035 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 SARSP49591 514 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 PSMC5P62195 406 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 PUS10Q3MIT2 529 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 KRT40Q6A162 431 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 NLRP7Q8WX94 980 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 ATP6V0A4Q9HBG4 840 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 ST3GAL5Q9UNP4 418 aa18.62■□□□□ 0.57
PDLIM2-217ENST00000491330 DDX11L8A8MPP1 907 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 C5orf67F2Z3F1 127 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 VTNP04004 478 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 NLRP11P59045 1033 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 CSPP1Q1MSJ5 1256 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 EP400NLQ6ZTU2 488 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 PIK3AP1Q6ZUJ8 805 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 OTUD6AQ7L8S5 288 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 ABI1Q8IZP0 508 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 OSMRQ99650 979 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 ADAM2Q99965 735 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 GCOM2Q9BZD3 368 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 OSBPL7Q9BZF2 842 aa18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 NSUN3Q9H649 340 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-217ENST00000491330 NOC2LQ9Y3T9 749 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms