RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 KAT6AQ92794 2004 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 GALR2O43603 387 aaPredicted RBP17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 BRD1O95696 1058 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 IGHDP01880 384 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 RPLP2P05387 115 aaKnown RBP17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 SRGAP2BP0DMP2 458 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 ACTR2P61160 394 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 MTHFD1LQ6UB35 978 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 CYP2W1Q8TAV3 490 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 LY9Q9HBG7 655 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 JADE2Q9NQC1 790 aa17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
SCAMP3-208ENST00000490999 GVINP1Q7Z2Y8 2422 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 RIF1Q5UIP0 2472 aaKnown RBP17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 SMIM35A0A1B0GVV1 85 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 PRR23AA6NEV1 266 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 SPDYE3A6NKU9 549 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 C2CD4DB7Z1M9 353 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 RPS6KA5O75582 802 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 PDE4AP27815 886 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 ITGB3BPQ13352 177 aaPredicted RBP17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 KCNC3Q14003 757 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 MB21D2Q8IYB1 491 aaPredicted RBP17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 SRBD1Q8N5C6 995 aaKnown RBP17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 NCOA7Q8NI08 942 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 CWH43Q9H720 699 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 KCNH7Q9NS40 1196 aa17.53■□□□□ 0.4
SCAMP3-208ENST00000490999 DNAH14Q0VDD8 3507 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 CACNA1AO00555 2505 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 PTPRZ1P23471 2315 aaPredicted RBP17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 DDX39AO00148 427 aaKnown RBP17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 DDAH1O94760 285 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 WEE2P0C1S8 567 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 GSPT1P15170 499 aaKnown RBP17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 KIF5BP33176 963 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 STAT5BP51692 787 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 MTMR3Q13615 1198 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 IGDCC4Q8TDY8 1250 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 OSMRQ99650 979 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 POMKQ9H5K3 350 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 RGS18Q9NS28 235 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 PCDHA6Q9UN73 950 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 ST3GAL5Q9UNP4 418 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 PCDHA8Q9Y5H6 950 aa17.52■□□□□ 0.4
SCAMP3-208ENST00000490999 FSD2A1L4K1 749 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 C9IYK1 514 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 ASGR2P07307 311 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 ARP10275 920 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 LAG3P18627 525 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 KLRC1P26715 233 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 COL9A3Q14050 684 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 KIZQ2M2Z5 673 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 FNDC1Q4ZHG4 1894 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 SLC24A5Q71RS6 500 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 HEATR3Q7Z4Q2 680 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 FRMD5Q7Z6J6 570 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 FAM228AQ86W67 206 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 CCDC82Q8N4S0 544 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 MRPS27Q92552 414 aaKnown RBP17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 IRF2BPLQ9H1B7 796 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 RWDD1Q9H446 243 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 C1orf112Q9NSG2 853 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 LOXHD1Q8IVV2 1947 aa17.51■□□□□ 0.39
SCAMP3-208ENST00000490999 PROB1E7EW31 1015 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 CCNE2O96020 404 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 CA8P35219 290 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 TMEM184AQ6ZMB5 413 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 LRRC55Q6ZSA7 311 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 PLPPR4Q7Z2D5 763 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 KIAA0319LQ8IZA0 1049 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 MXRA8Q9BRK3 442 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 ATP6V0A4Q9HBG4 840 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 SORCS3Q9UPU3 1222 aa17.5■□□□□ 0.39
SCAMP3-208ENST00000490999 BACH1O14867 736 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 PDE12Q6L8Q7 609 aaKnown RBP17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 CCDC60Q8IWA6 550 aaPredicted RBP17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 NME8Q8N427 588 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 FEZF2Q8TBJ5 459 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 RNF19AQ9NV58 838 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 TMEM161AQ9NX61 479 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 LZTS1Q9Y250 596 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 NR2E1Q9Y466 385 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 HCFC2Q9Y5Z7 792 aa17.49■□□□□ 0.39
SCAMP3-208ENST00000490999 PRC1O43663 620 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 VTNP04004 478 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 NBL1P41271 181 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 PLCB3Q01970 1234 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 KANK3Q6NY19 840 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 KCNT2Q6UVM3 1135 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 TRMT1LQ7Z2T5 733 aaKnown RBP17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 TMC7Q7Z402 723 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 RNF169Q8NCN4 708 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 RASGRP4Q8TDF6 673 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 TNPO1Q92973 898 aaKnown RBP17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 CASD1Q96PB1 797 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 AGO4Q9HCK5 861 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms