RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 TRIOO75962 3097 aa18.9■□□□□ 0.62
SRGAP3-209ENST00000490889 PLXNA4Q9HCM2 1894 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 IPO5O00410 1097 aaKnown RBP18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 IBSPP21815 317 aaPredicted RBP18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 IRS1P35568 1242 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 NFX1Q12986 1120 aaKnown RBP18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 FAM160B1Q5W0V3 765 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 SWSAP1Q6NVH7 229 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 PDXDC2PQ6P474 469 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 Q6ZUG5 572 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 ADGRD2Q7Z7M1 963 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 KLHL23Q8NBE8 558 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 SPPL3Q8TCT6 385 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 KCNB2Q92953 911 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 ZMYND12Q9H0C1 365 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 IGFLR1Q9H665 355 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 HCN4Q9Y3Q4 1203 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 EVPLQ92817 2033 aa18.89■□□□□ 0.61
SRGAP3-209ENST00000490889 ESYT2A0FGR8 921 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 C19orf67A6NJJ6 358 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 MBTPS2O43462 519 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 NCK2O43639 380 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 PPFIA3O75145 1194 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 C22orf31O95567 290 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 STAG3L1P0CL83 205 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 RASGRP4Q8TDF6 673 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 BRF1Q92994 677 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 PPP1R16BQ96T49 567 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 COL1A2P08123 1366 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 NID2Q14112 1375 aa18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 FNDC1Q4ZHG4 1894 aaPredicted RBP18.88■□□□□ 0.61
SRGAP3-209ENST00000490889 HMGB1P09429 215 aaKnown RBP18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 SARSP49591 514 aaKnown RBP18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 FGD1P98174 961 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 SMAD2Q15796 467 aaKnown RBP18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 ZNF484Q5JVG2 852 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 MIS18BP1Q6P0N0 1132 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 ADHFE1Q8IWW8 467 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 PHKBQ93100 1093 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 JAKMIP1Q96N16 626 aaKnown RBP18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 ZNF577Q9BSK1 485 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 HCSTQ9UBK5 93 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 PRKAG3Q9UGI9 489 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 PCDHGC5Q9Y5F6 944 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 MAFBQ9Y5Q3 323 aaPredicted RBP18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 SNX14Q9Y5W7 946 aa18.87■□□□□ 0.61
SRGAP3-209ENST00000490889 PRR33A8MZF0 331 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 EDIL3O43854 480 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 RPS6KA5O75582 802 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 ADAM15Q13444 863 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 KIZQ2M2Z5 673 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 NAALADL2Q58DX5 795 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 FAM102BQ5T8I3 360 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 TRMT1LQ7Z2T5 733 aaKnown RBP18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 REXO1Q8N1G1 1221 aaKnown RBP18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 POF1BQ8WVV4 589 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 OSMRQ99650 979 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 ADAM2Q99965 735 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 LRFN2Q9ULH4 789 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 ST3GAL5Q9UNP4 418 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 FAM50BQ9Y247 325 aa18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 ARIH1Q9Y4X5 557 aaPredicted RBP18.86■□□□□ 0.61
SRGAP3-209ENST00000490889 C9IYK1 514 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 PRPF3O43395 683 aaKnown RBP18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 DCXO43602 365 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 VTNP04004 478 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 ALADP13716 330 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 HSPA4P34932 840 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 NTRK3Q16288 839 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 ZNF746Q6NUN9 644 aaPredicted RBP18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 FAM228AQ86W67 206 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 LENG9Q96B70 501 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 C6orf50Q9HD87 102 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 RGS18Q9NS28 235 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 CLEC1BQ9P126 229 aa18.85■□□□□ 0.61
SRGAP3-209ENST00000490889 MYH9P35579 1960 aaKnown RBP18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 WDR81Q562E7 1941 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 CCDC196A0A1B0GTZ2 297 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 GPR32O75388 356 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 CIITAP33076 1130 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 SETQ01105 290 aaPredicted RBP18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 SMAD4Q13485 552 aaKnown RBP18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 PRR16Q569H4 304 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 BLOC1S2Q6QNY1 142 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 CKAP2LQ8IYA6 745 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 BBXQ8WY36 941 aaPredicted RBP18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 MSLNLQ96KJ4 702 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 AGXT2Q9BYV1 514 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 TBC1D22BQ9NU19 505 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 GABBR1Q9UBS5 961 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 CD207Q9UJ71 328 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 PCDHB7Q9Y5E2 793 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 MUC6Q6W4X9 2439 aa18.84■□□□□ 0.61
SRGAP3-209ENST00000490889 DENND3A2RUS2 1198 aa18.83■□□□□ 0.6
SRGAP3-209ENST00000490889 TBKBP1A7MCY6 615 aa18.83■□□□□ 0.6
SRGAP3-209ENST00000490889 GLP2RO95838 553 aa18.83■□□□□ 0.6
SRGAP3-209ENST00000490889 RPS6KB1P23443 525 aa18.83■□□□□ 0.6
SRGAP3-209ENST00000490889 NDUFV1P49821 464 aa18.83■□□□□ 0.6
SRGAP3-209ENST00000490889 CLCN3P51790 818 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms