RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 PPP2R2DQ66LE6 453 aa20.43■□□□□ 0.86
COL9A3-214ENST00000490398 RSPH3Q86UC2 560 aa20.43■□□□□ 0.86
COL9A3-214ENST00000490398 BANK1Q8NDB2 785 aa20.43■□□□□ 0.86
COL9A3-214ENST00000490398 TNPO1Q92973 898 aaKnown RBP20.43■□□□□ 0.86
COL9A3-214ENST00000490398 PPP1R16BQ96T49 567 aa20.43■□□□□ 0.86
COL9A3-214ENST00000490398 SLC28A3Q9HAS3 691 aa20.43■□□□□ 0.86
COL9A3-214ENST00000490398 WRAP73Q9P2S5 460 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-214ENST00000490398 TRPV2Q9Y5S1 764 aa20.43■□□□□ 0.86
COL9A3-214ENST00000490398 KAT6AQ92794 2004 aa20.43■□□□□ 0.86
COL9A3-214ENST00000490398 A0A0C4DFX4 3053 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 KIF28PB7ZC32 967 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 GJB5O95377 273 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 CLCN3P51790 818 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 SPIRE1Q08AE8 756 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 MYOCDQ8IZQ8 938 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 LINC01465Q8N7H1 131 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 LINC01599Q8WXQ3 324 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 TMX3Q96JJ7 454 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 FAM20AQ96MK3 541 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 UPF2Q9HAU5 1272 aaKnown RBP20.42■□□□□ 0.86
COL9A3-214ENST00000490398 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 REV3LO60673 3130 aa20.42■□□□□ 0.86
COL9A3-214ENST00000490398 TRANK1O15050 2925 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 EPOPA6NHQ4 379 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 RFXAPO00287 272 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 TLL1O43897 1013 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 ATP2B1P20020 1258 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 TAP1Q03518 808 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 PPP2R5CQ13362 524 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 LRRC71Q8N4P6 559 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 FBXO18Q8NFZ0 1043 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 RDM1Q8NG50 284 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 TMEM40Q8WWA1 233 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 CEP89Q96ST8 783 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 BACH2Q9BYV9 841 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 CELF4Q9BZC1 486 aaKnown RBP20.41■□□□□ 0.86
COL9A3-214ENST00000490398 TMEM60Q9H2L4 133 aa20.41■□□□□ 0.86
COL9A3-214ENST00000490398 ST18O60284 1047 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 VTNP04004 478 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 FOSL2P15408 326 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 HMGN5P82970 282 aaKnown RBP20.4■□□□□ 0.86
COL9A3-214ENST00000490398 TARBP2Q15633 366 aaKnown RBP20.4■□□□□ 0.86
COL9A3-214ENST00000490398 TMEM266Q2M3C6 531 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 IER5Q5VY09 327 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 TSHZ1Q6ZSZ6 1077 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 RTN4RL1Q86UN2 441 aaPredicted RBP20.4■□□□□ 0.86
COL9A3-214ENST00000490398 METTL13Q8N6R0 699 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 FAM167AQ96KS9 214 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 ZBED2Q9BTP6 218 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 NRBP2Q9NSY0 501 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 GINS2Q9Y248 185 aa20.4■□□□□ 0.86
COL9A3-214ENST00000490398 ENPP3O14638 875 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 TBX3O15119 743 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 EFCAB14O75071 495 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 UPP2O95045 317 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 AMHP03971 560 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 DRP2Q13474 957 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 KIZQ2M2Z5 673 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 MTERF2Q49AM1 385 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 PLA2G4FQ68DD2 849 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 NCAPH2Q6IBW4 605 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 ANO5Q75V66 913 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 NME8Q8N427 588 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 ZNF579Q8NAF0 562 aaKnown RBP20.39■□□□□ 0.85
COL9A3-214ENST00000490398 FAM184AQ8NB25 1140 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 ZNF668Q96K58 619 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-214ENST00000490398 NAP1L4Q99733 375 aaKnown RBP20.39■□□□□ 0.85
COL9A3-214ENST00000490398 TMX1Q9H3N1 280 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 RGL1Q9NZL6 768 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 SEPT9Q9UHD8 586 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-214ENST00000490398 PADI3Q9ULW8 664 aa20.39■□□□□ 0.85
COL9A3-214ENST00000490398 NOC2LQ9Y3T9 749 aaKnown RBP20.39■□□□□ 0.85
COL9A3-214ENST00000490398 MICAL3Q7RTP6 2002 aa20.38■□□□□ 0.85
COL9A3-214ENST00000490398 KDM3AQ9Y4C1 1321 aa20.38■□□□□ 0.85
COL9A3-214ENST00000490398 SAFBQ15424 915 aaKnown RBP eCLIP20.38■□□□□ 0.85
COL9A3-214ENST00000490398 EFCAB12Q6NXP0 572 aa20.38■□□□□ 0.85
COL9A3-214ENST00000490398 APBB2Q92870 758 aa20.38■□□□□ 0.85
COL9A3-214ENST00000490398 TOP1MTQ969P6 601 aa20.38■□□□□ 0.85
COL9A3-214ENST00000490398 DYDC2Q96IM9 177 aa20.38■□□□□ 0.85
COL9A3-214ENST00000490398 MTMR9Q96QG7 549 aa20.38■□□□□ 0.85
COL9A3-214ENST00000490398 RAD9AQ99638 391 aa20.38■□□□□ 0.85
COL9A3-214ENST00000490398 NIFKQ9BYG3 293 aaKnown RBP20.38■□□□□ 0.85
COL9A3-214ENST00000490398 DDX11L8A8MPP1 907 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 ZBTB39O15060 712 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 MARCH6O60337 910 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 GPR32O75388 356 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 HTRA4P83105 476 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-214ENST00000490398 NBR1Q14596 966 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 EPHA7Q15375 998 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 CALCRLQ16602 461 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 XKR3Q5GH77 459 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 USP38Q8NB14 1042 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 OSMRQ99650 979 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 SUGCTQ9HAC7 445 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 CEP131Q9UPN4 1083 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 WDR81Q562E7 1941 aa20.37■□□□□ 0.85
COL9A3-214ENST00000490398 XIRP2A4UGR9 3374 aa20.36■□□□□ 0.85
COL9A3-214ENST00000490398 LINC01553A4QN01 128 aa20.36■□□□□ 0.85
COL9A3-214ENST00000490398 M0QZ92 97 aa20.36■□□□□ 0.85
COL9A3-214ENST00000490398 MAGEB2O15479 319 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms