RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ERVK-21P61565 698 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 PRKCEQ02156 737 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 PPP4R3AQ6IN85 833 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 FAM43BQ6ZT52 329 aaPredicted RBP19.66■□□□□ 0.74
SEC13-218ENST00000490283 ETNPPLQ8TBG4 499 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 GJA10Q969M2 543 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 FAM20AQ96MK3 541 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 SAMD11Q96NU1 681 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 MAP7D2Q96T17 732 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 GJB4Q9NTQ9 266 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 ZBTB42B2RXF5 422 aa19.65■□□□□ 0.74
SEC13-218ENST00000490283 DTNBO60941 627 aa19.65■□□□□ 0.74
SEC13-218ENST00000490283 C22orf31O95567 290 aa19.65■□□□□ 0.74
SEC13-218ENST00000490283 KIAA0319LQ8IZA0 1049 aa19.65■□□□□ 0.74
SEC13-218ENST00000490283 OXER1Q8TDS5 423 aa19.65■□□□□ 0.74
SEC13-218ENST00000490283 AGO3Q9H9G7 860 aaKnown RBP19.65■□□□□ 0.74
SEC13-218ENST00000490283 PADI3Q9ULW8 664 aa19.65■□□□□ 0.74
SEC13-218ENST00000490283 MICAL3Q7RTP6 2002 aa19.64■□□□□ 0.74
SEC13-218ENST00000490283 MYO9BQ13459 2157 aa19.64■□□□□ 0.74
SEC13-218ENST00000490283 EPOPA6NHQ4 379 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 ENPP3O14638 875 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 SLC37A4O43826 429 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 RPS6KA5O75582 802 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 BAG4O95429 457 aaKnown RBP19.64■□□□□ 0.73
SEC13-218ENST00000490283 FDPSP14324 419 aaKnown RBP19.64■□□□□ 0.73
SEC13-218ENST00000490283 POU3F3P20264 500 aaPredicted RBP19.64■□□□□ 0.73
SEC13-218ENST00000490283 GRB10Q13322 594 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 SKIV2LQ15477 1246 aaKnown RBP19.64■□□□□ 0.73
SEC13-218ENST00000490283 C8orf34Q49A92 452 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 ZNF710Q8N1W2 664 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 FBXO22Q8NEZ5 403 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 SP7Q8TDD2 431 aaPredicted RBP19.64■□□□□ 0.73
SEC13-218ENST00000490283 UPF2Q9HAU5 1272 aaKnown RBP19.64■□□□□ 0.73
SEC13-218ENST00000490283 THEGQ9P2T0 379 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 AKT3Q9Y243 479 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 MTCH2Q9Y6C9 303 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 CDH23Q9H251 3354 aa19.64■□□□□ 0.73
SEC13-218ENST00000490283 RBAK-RBAKDNI3L0D1 243 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 TBX3O15119 743 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 ZNF862O60290 1169 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 JAK2O60674 1132 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 DKC1O60832 514 aaKnown RBP eCLIP19.63■□□□□ 0.73
SEC13-218ENST00000490283 STAG3L1P0CL83 205 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 FOSBP53539 338 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 TBC1D8BQ0IIM8 1120 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 NFX1Q12986 1120 aaKnown RBP19.63■□□□□ 0.73
SEC13-218ENST00000490283 SAFBQ15424 915 aaKnown RBP eCLIP19.63■□□□□ 0.73
SEC13-218ENST00000490283 UGCGQ16739 394 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 XKR3Q5GH77 459 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 EFCAB12Q6NXP0 572 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 GDPD5Q8WTR4 605 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 ZSCAN31Q96LW9 406 aaPredicted RBP19.63■□□□□ 0.73
SEC13-218ENST00000490283 RNF216Q9NWF9 866 aaPredicted RBP19.63■□□□□ 0.73
SEC13-218ENST00000490283 SEPT9Q9UHD8 586 aaPredicted RBP19.63■□□□□ 0.73
SEC13-218ENST00000490283 PTPRSQ13332 1948 aa19.63■□□□□ 0.73
SEC13-218ENST00000490283 GPR182O15218 404 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 MMP1P03956 469 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 CLCN3P51790 818 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 CRYBB1P53674 252 aaPredicted RBP19.62■□□□□ 0.73
SEC13-218ENST00000490283 NR5A1Q13285 461 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 KIZQ2M2Z5 673 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 SPRED2Q7Z698 418 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 CCDC83Q8IWF9 413 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 DIS3L2Q8IYB7 885 aaKnown RBP19.62■□□□□ 0.73
SEC13-218ENST00000490283 SLFN12Q8IYM2 578 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 FIBCD1Q8N539 461 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 SCLT1Q96NL6 688 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 PPP1R16BQ96T49 567 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 LLPHQ9BRT6 129 aaKnown RBP19.62■□□□□ 0.73
SEC13-218ENST00000490283 KCNMB3Q9NPA1 279 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 SH2B1Q9NRF2 756 aaPredicted RBP19.62■□□□□ 0.73
SEC13-218ENST00000490283 LMCD1Q9NZU5 365 aa19.62■□□□□ 0.73
SEC13-218ENST00000490283 ADGRA3Q8IWK6 1321 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 DENND3A2RUS2 1198 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 VTNP04004 478 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 PSMC5P62195 406 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 PPP2R5CQ13362 524 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 TMEM266Q2M3C6 531 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 KRT40Q6A162 431 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 B3GNT9Q6UX72 402 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 NPAS4Q8IUM7 802 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 IL27Q8NEV9 243 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 ATXN2LQ8WWM7 1075 aaKnown RBP19.61■□□□□ 0.73
SEC13-218ENST00000490283 SYMPKQ92797 1274 aaKnown RBP19.61■□□□□ 0.73
SEC13-218ENST00000490283 OSMRQ99650 979 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 C17orf80Q9BSJ5 609 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 SUGCTQ9HAC7 445 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 LRFN2Q9ULH4 789 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 RWDD3Q9Y3V2 267 aa19.61■□□□□ 0.73
SEC13-218ENST00000490283 CHD9Q3L8U1 2897 aa19.6■□□□□ 0.73
SEC13-218ENST00000490283 DNM2P50570 870 aa19.6■□□□□ 0.73
SEC13-218ENST00000490283 HMGN5P82970 282 aaKnown RBP19.6■□□□□ 0.73
SEC13-218ENST00000490283 PTPROQ16827 1216 aa19.6■□□□□ 0.73
SEC13-218ENST00000490283 MTERF2Q49AM1 385 aa19.6■□□□□ 0.73
SEC13-218ENST00000490283 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
SEC13-218ENST00000490283 LRRC71Q8N4P6 559 aa19.6■□□□□ 0.73
SEC13-218ENST00000490283 BANK1Q8NDB2 785 aa19.6■□□□□ 0.73
SEC13-218ENST00000490283 NOC2LQ9Y3T9 749 aaKnown RBP19.6■□□□□ 0.73
SEC13-218ENST00000490283 DDX11L8A8MPP1 907 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 BTBD18B2RXH4 712 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms