RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 SPTLC2O15270 562 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 PARNO95453 639 aaKnown RBP19.51■□□□□ 0.71
ERCC3-207ENST00000490062 CYP2C9P11712 490 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 KLRC1P26715 233 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 DNM1Q05193 864 aaKnown RBP19.51■□□□□ 0.71
ERCC3-207ENST00000490062 STK38Q15208 465 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 EXOC8Q8IYI6 725 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 ZNF710Q8N1W2 664 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 KRI1Q8N9T8 703 aaKnown RBP19.51■□□□□ 0.71
ERCC3-207ENST00000490062 ZNF579Q8NAF0 562 aaKnown RBP19.51■□□□□ 0.71
ERCC3-207ENST00000490062 SNX29Q8TEQ0 813 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 NACC1Q96RE7 527 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 CCSER1Q9C0I3 900 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 CYP26B1Q9NR63 512 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 TFIP11Q9UBB9 837 aaKnown RBP19.51■□□□□ 0.71
ERCC3-207ENST00000490062 LOXHD1Q8IVV2 1947 aa19.51■□□□□ 0.71
ERCC3-207ENST00000490062 TANC1Q9C0D5 1861 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 ITGB8P26012 769 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 CCT6AP40227 531 aaKnown RBP19.5■□□□□ 0.71
ERCC3-207ENST00000490062 KRT85P78386 507 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 GRIN1Q05586 938 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 FAM26DQ5JW98 314 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 MFSD5Q6N075 450 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 TRAF7Q6Q0C0 670 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 NME8Q8N427 588 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 WNT8BQ93098 351 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 JPH2Q9BR39 696 aaPredicted RBP19.5■□□□□ 0.71
ERCC3-207ENST00000490062 NT5C3AQ9H0P0 336 aa19.5■□□□□ 0.71
ERCC3-207ENST00000490062 DHX33Q9H6R0 707 aaKnown RBP19.5■□□□□ 0.71
ERCC3-207ENST00000490062 SEPT9Q9UHD8 586 aaPredicted RBP19.5■□□□□ 0.71
ERCC3-207ENST00000490062 ARID2Q68CP9 1835 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 PP2D1A8MPX8 630 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 GAS2O43903 313 aaKnown RBP19.49■□□□□ 0.71
ERCC3-207ENST00000490062 MAFO75444 373 aaPredicted RBP19.49■□□□□ 0.71
ERCC3-207ENST00000490062 CKBP12277 381 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 RAG1P15918 1043 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 MARCKSP29966 332 aaPredicted RBP19.49■□□□□ 0.71
ERCC3-207ENST00000490062 RFC5P40937 340 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 RARRES1P49788 294 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 CEBPZQ03701 1054 aaKnown RBP19.49■□□□□ 0.71
ERCC3-207ENST00000490062 ECM1Q16610 540 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 TRAPPC12Q8WVT3 735 aa19.49■□□□□ 0.71
ERCC3-207ENST00000490062 IPO9Q96P70 1041 aaKnown RBP19.49■□□□□ 0.71
ERCC3-207ENST00000490062 RFC2P35250 354 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 IGBP1P78318 339 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 TBC1D8BQ0IIM8 1120 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 TMEM119Q4V9L6 283 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 RUFY4Q6ZNE9 571 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 RSPH3Q86UC2 560 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 CEP170P1Q96L14 293 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 CSRNP2Q9H175 543 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 WNT8AQ9H1J5 351 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 PRDM5Q9NQX1 630 aaPredicted RBP19.48■□□□□ 0.71
ERCC3-207ENST00000490062 CHMP5Q9NZZ3 219 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 ZMYND8Q9ULU4 1186 aaPredicted RBP19.48■□□□□ 0.71
ERCC3-207ENST00000490062 TCHHQ07283 1943 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 CEP290O15078 2479 aa19.48■□□□□ 0.71
ERCC3-207ENST00000490062 EVPLQ92817 2033 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 TMEM150BA6NC51 233 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 H0YGN5 161 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 CUTAO60888 179 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 IQCF3P0C7M6 154 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 SELPP16109 830 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 CDC25AP30304 524 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 UBA7P41226 1012 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 NPEPPSP55786 919 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 GRB10Q13322 594 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 MTERF2Q49AM1 385 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 AXDND1Q5T1B0 1012 aaPredicted RBP19.47■□□□□ 0.71
ERCC3-207ENST00000490062 PLA2G4FQ68DD2 849 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 POTEGQ6S5H5 508 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 FAM43BQ6ZT52 329 aaPredicted RBP19.47■□□□□ 0.71
ERCC3-207ENST00000490062 CABP7Q86V35 215 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 KIAA0319LQ8IZA0 1049 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 RETREG2Q8NC44 543 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 PNMA5Q96PV4 448 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 GDF15Q99988 308 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 SCAND2PQ9GZW5 306 aaPredicted RBP19.47■□□□□ 0.71
ERCC3-207ENST00000490062 UMODL1Q5DID0 1318 aa19.47■□□□□ 0.71
ERCC3-207ENST00000490062 ZBTB39O15060 712 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 DGAT1O75907 488 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 EYA4O95677 639 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 TMOD1P28289 359 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 MGAT3Q09327 533 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 XKR9Q5GH70 373 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 LRRC8DQ7L1W4 858 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 TMEM199Q8N511 208 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 LEO1Q8WVC0 666 aaPredicted RBP19.46■□□□□ 0.71
ERCC3-207ENST00000490062 SLC7A3Q8WY07 619 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 DDX19AQ9NUU7 478 aaKnown RBP19.46■□□□□ 0.71
ERCC3-207ENST00000490062 KIAA1024Q9UPX6 916 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 SQORQ9Y6N5 450 aa19.46■□□□□ 0.71
ERCC3-207ENST00000490062 PFKMP08237 780 aa19.45■□□□□ 0.7
ERCC3-207ENST00000490062 SYN1P17600 705 aa19.45■□□□□ 0.7
ERCC3-207ENST00000490062 CYP2C18P33260 490 aa19.45■□□□□ 0.7
ERCC3-207ENST00000490062 BMP8BP34820 402 aa19.45■□□□□ 0.7
ERCC3-207ENST00000490062 CDC42EP1Q00587 391 aa19.45■□□□□ 0.7
ERCC3-207ENST00000490062 ZNF618Q5T7W0 954 aa19.45■□□□□ 0.7
ERCC3-207ENST00000490062 EFCAB12Q6NXP0 572 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms