RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 TPH2Q8IWU9 490 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 TEPSINQ96N21 525 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 GANQ9H2C0 597 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 L1RE1Q9UN81 338 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 HYOU1Q9Y4L1 999 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 GUCY2CP25092 1073 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 CASP5P51878 434 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 ASIC2Q16515 512 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 EXOC3L4Q17RC7 722 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 ANGEL2Q5VTE6 544 aaKnown RBP16.41■□□□□ 0.22
COL9A1-208ENST00000489611 B3GNT9Q6UX72 402 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 GBP6Q6ZN66 633 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 PNKPQ96T60 521 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 MXRA8Q9BRK3 442 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 NLRC4Q9NPP4 1024 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 PCDHB13Q9Y5F0 798 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 ASTN1O14525 1302 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 IPO5O00410 1097 aaKnown RBP16.4■□□□□ 0.22
COL9A1-208ENST00000489611 RHOXF2BP0C7M4 288 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 PSMC2P35998 433 aaKnown RBP16.4■□□□□ 0.22
COL9A1-208ENST00000489611 KLHL30Q0D2K2 578 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 SMC1AQ14683 1233 aaKnown RBP16.4■□□□□ 0.22
COL9A1-208ENST00000489611 HS2ST1Q7LGA3 356 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 TMEM174Q8WUU8 243 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 DYDC2Q96IM9 177 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 RHOXF2Q9BQY4 288 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 KIAA1683Q9H0B3 1180 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 VIPAS39Q9H9C1 493 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 RGL1Q9NZL6 768 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
COL9A1-208ENST00000489611 DICER1Q9UPY3 1922 aaKnown RBP16.4■□□□□ 0.22
COL9A1-208ENST00000489611 GFPT2O94808 682 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 MYBP10242 640 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 MAPTP10636 758 aaKnown RBP16.39■□□□□ 0.21
COL9A1-208ENST00000489611 HOXD13P35453 343 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 IFI16Q16666 785 aaKnown RBP16.39■□□□□ 0.21
COL9A1-208ENST00000489611 VPS36Q86VN1 386 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 MYCT1Q8N699 235 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 SPAG5Q96R06 1193 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 UIMC1Q96RL1 719 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 MMS19Q96T76 1030 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-208ENST00000489611 HDAC6Q9UBN7 1215 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 CCPG1Q9ULG6 757 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 RPTORQ8N122 1335 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 TLR2O60603 784 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 SASH3O75995 380 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 PRPF6O94906 941 aaKnown RBP16.39■□□□□ 0.21
COL9A1-208ENST00000489611 PRKCIP41743 596 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 PAFAH1B1P43034 410 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 GFPT1Q06210 699 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-208ENST00000489611 RAPGEF1Q13905 1077 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 CTTNQ14247 550 aaKnown RBP16.39■□□□□ 0.21
COL9A1-208ENST00000489611 PPP2R5AQ15172 486 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 NAB2Q15742 525 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 MMGT1Q8N4V1 131 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 NOA1Q8NC60 698 aaKnown RBP16.39■□□□□ 0.21
COL9A1-208ENST00000489611 TIPINQ9BVW5 301 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 SMCHD1A6NHR9 2005 aa16.39■□□□□ 0.21
COL9A1-208ENST00000489611 AKAP3O75969 853 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 UCHL3P15374 230 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 VSNL1P62760 191 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 KLHDC7AQ5VTJ3 777 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 ZNF720Q7Z2F6 126 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 FAM178BQ8IXR5 827 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 PRDM10Q9NQV6 1147 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 GGA3Q9NZ52 723 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 TFR2Q9UP52 801 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 CAPN6Q9Y6Q1 641 aa16.38■□□□□ 0.21
COL9A1-208ENST00000489611 CTNND1O60716 968 aaKnown RBP16.37■□□□□ 0.21
COL9A1-208ENST00000489611 P4HBP07237 508 aaKnown RBP16.37■□□□□ 0.21
COL9A1-208ENST00000489611 PON1P27169 355 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 NBPF12Q5TAG4 269 aaPredicted RBP16.37■□□□□ 0.21
COL9A1-208ENST00000489611 PCNX4Q63HM2 1172 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 SLC9A9Q8IVB4 645 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 SLC17A8Q8NDX2 589 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 PIGOQ8TEQ8 1089 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 TBC1D5Q92609 795 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 SLC35C1Q96A29 364 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 CRACR2AQ9BSW2 395 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 TBC1D22BQ9NU19 505 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 DBR1Q9UK59 544 aaKnown RBP16.37■□□□□ 0.21
COL9A1-208ENST00000489611 FRMD4BQ9Y2L6 1034 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 ARHGEF35A5YM69 484 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 PHF20L1A8MW92 1017 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 RSPH10B2B2RC85 870 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 LYPLA2O95372 231 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 MOCS3O95396 460 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 CCDC172P0C7W6 258 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 RSPH10BP0C881 870 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 ERCC3P19447 782 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 RFX1P22670 979 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 SNRPFP62306 86 aaKnown RBP16.37■□□□□ 0.21
COL9A1-208ENST00000489611 GLE1Q53GS7 698 aaKnown RBP16.37■□□□□ 0.21
COL9A1-208ENST00000489611 CCDC181Q5TID7 509 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 CREG2Q8IUH2 290 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 VTI1AQ96AJ9 217 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms