RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 CAGE1Q8TC20 777 aa8.82□□□□□ -1
SSR1-210ENST00000489567 DNAJB3Q8WWF6 145 aa8.82□□□□□ -1
SSR1-210ENST00000489567 CEP89Q96ST8 783 aa8.82□□□□□ -1
SSR1-210ENST00000489567 LXNQ9BS40 222 aa8.82□□□□□ -1
SSR1-210ENST00000489567 UBE2OQ9C0C9 1292 aaKnown RBP8.82□□□□□ -1
SSR1-210ENST00000489567 CLIC4Q9Y696 253 aa8.82□□□□□ -1
SSR1-210ENST00000489567 PP2D1A8MPX8 630 aa8.81□□□□□ -1
SSR1-210ENST00000489567 NBNO60934 754 aa8.81□□□□□ -1
SSR1-210ENST00000489567 MED24O75448 989 aa8.81□□□□□ -1
SSR1-210ENST00000489567 C22orf31O95567 290 aa8.81□□□□□ -1
SSR1-210ENST00000489567 CTSHP09668 335 aa8.81□□□□□ -1
SSR1-210ENST00000489567 SELPP16109 830 aa8.81□□□□□ -1
SSR1-210ENST00000489567 BMP8BP34820 402 aa8.81□□□□□ -1
SSR1-210ENST00000489567 NPEPPSP55786 919 aa8.81□□□□□ -1
SSR1-210ENST00000489567 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
SSR1-210ENST00000489567 SHHQ15465 462 aa8.81□□□□□ -1
SSR1-210ENST00000489567 TARBP2Q15633 366 aaKnown RBP8.81□□□□□ -1
SSR1-210ENST00000489567 LRRC8DQ7L1W4 858 aa8.81□□□□□ -1
SSR1-210ENST00000489567 DEFB128Q7Z7B8 93 aa8.81□□□□□ -1
SSR1-210ENST00000489567 TPH2Q8IWU9 490 aa8.81□□□□□ -1
SSR1-210ENST00000489567 TMEM199Q8N511 208 aa8.81□□□□□ -1
SSR1-210ENST00000489567 NIFKQ9BYG3 293 aaKnown RBP8.81□□□□□ -1
SSR1-210ENST00000489567 FAM49AQ9H0Q0 323 aaPredicted RBP8.81□□□□□ -1
SSR1-210ENST00000489567 SEPT9Q9UHD8 586 aaPredicted RBP8.81□□□□□ -1
SSR1-210ENST00000489567 SCN5AQ14524 2016 aa8.81□□□□□ -1
SSR1-210ENST00000489567 MYH9P35579 1960 aaKnown RBP8.81□□□□□ -1
SSR1-210ENST00000489567 COL1A2P08123 1366 aa8.81□□□□□ -1
SSR1-210ENST00000489567 DDX11L8A8MPP1 907 aa8.81□□□□□ -1
SSR1-210ENST00000489567 CHRNA1P02708 482 aa8.81□□□□□ -1
SSR1-210ENST00000489567 CDC25AP30304 524 aa8.81□□□□□ -1
SSR1-210ENST00000489567 PRPHP41219 470 aa8.81□□□□□ -1
SSR1-210ENST00000489567 GRIN1Q05586 938 aa8.81□□□□□ -1
SSR1-210ENST00000489567 TMEM62Q0P6H9 643 aa8.81□□□□□ -1
SSR1-210ENST00000489567 DRP2Q13474 957 aa8.81□□□□□ -1
SSR1-210ENST00000489567 PTPAQ15257 358 aa8.81□□□□□ -1
SSR1-210ENST00000489567 ECM1Q16610 540 aa8.81□□□□□ -1
SSR1-210ENST00000489567 TCTN1Q2MV58 587 aa8.81□□□□□ -1
SSR1-210ENST00000489567 MTERF2Q49AM1 385 aa8.81□□□□□ -1
SSR1-210ENST00000489567 XKR3Q5GH77 459 aa8.81□□□□□ -1
SSR1-210ENST00000489567 ZNF484Q5JVG2 852 aa8.81□□□□□ -1
SSR1-210ENST00000489567 TMEM240Q5SV17 173 aa8.81□□□□□ -1
SSR1-210ENST00000489567 TAF2Q6P1X5 1199 aa8.81□□□□□ -1
SSR1-210ENST00000489567 CATSPER3Q86XQ3 398 aa8.81□□□□□ -1
SSR1-210ENST00000489567 C4orf19Q8IY42 314 aa8.81□□□□□ -1
SSR1-210ENST00000489567 KIAA0319LQ8IZA0 1049 aa8.81□□□□□ -1
SSR1-210ENST00000489567 LRRC71Q8N4P6 559 aa8.81□□□□□ -1
SSR1-210ENST00000489567 IGSF22Q8N9C0 903 aa8.81□□□□□ -1
SSR1-210ENST00000489567 RETREG2Q8NC44 543 aa8.81□□□□□ -1
SSR1-210ENST00000489567 FAM167AQ96KS9 214 aa8.81□□□□□ -1
SSR1-210ENST00000489567 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.81□□□□□ -12e-18■■□□□ 12.7
SSR1-210ENST00000489567 NRBP2Q9NSY0 501 aa8.81□□□□□ -1
SSR1-210ENST00000489567 ZDHHC9Q9Y397 364 aa8.81□□□□□ -1
SSR1-210ENST00000489567 PCDHA2Q9Y5H9 948 aa8.81□□□□□ -1
SSR1-210ENST00000489567 TANC1Q9C0D5 1861 aa8.8□□□□□ -1
SSR1-210ENST00000489567 HAX1O00165 279 aa8.8□□□□□ -1
SSR1-210ENST00000489567 LAD1O00515 517 aa8.8□□□□□ -1
SSR1-210ENST00000489567 ZSCAN22P10073 491 aaPredicted RBP8.8□□□□□ -1
SSR1-210ENST00000489567 YWHABP31946 246 aaKnown RBP8.8□□□□□ -1
SSR1-210ENST00000489567 CLCN3P51790 818 aa8.8□□□□□ -1
SSR1-210ENST00000489567 CEBPZQ03701 1054 aaKnown RBP8.8□□□□□ -1
SSR1-210ENST00000489567 MGAT3Q09327 533 aa8.8□□□□□ -1
SSR1-210ENST00000489567 PPIGQ13427 754 aaKnown RBP eCLIP8.8□□□□□ -18e-18■□□□□ 9
SSR1-210ENST00000489567 FOXD4L6Q3SYB3 417 aaPredicted RBP8.8□□□□□ -1
SSR1-210ENST00000489567 FOXD4L3Q6VB84 417 aaPredicted RBP8.8□□□□□ -1
SSR1-210ENST00000489567 ZNF365Q70YC5 407 aa8.8□□□□□ -1
SSR1-210ENST00000489567 RPAINQ86UA6 219 aa8.8□□□□□ -1
SSR1-210ENST00000489567 CCDC155Q8N6L0 562 aa8.8□□□□□ -1
SSR1-210ENST00000489567 LINC01465Q8N7H1 131 aa8.8□□□□□ -1
SSR1-210ENST00000489567 PIGOQ8TEQ8 1089 aa8.8□□□□□ -1
SSR1-210ENST00000489567 TNPO1Q92973 898 aaKnown RBP8.8□□□□□ -1
SSR1-210ENST00000489567 USP28Q96RU2 1077 aa8.8□□□□□ -1
SSR1-210ENST00000489567 MMTAG2Q9BU76 263 aaKnown RBP8.8□□□□□ -1
SSR1-210ENST00000489567 ZSCAN16Q9H4T2 348 aaPredicted RBP8.8□□□□□ -1
SSR1-210ENST00000489567 ZSWIM4Q9H7M6 989 aa8.8□□□□□ -1
SSR1-210ENST00000489567 IL23AQ9NPF7 189 aa8.8□□□□□ -1
SSR1-210ENST00000489567 KAT6AQ92794 2004 aa8.79□□□□□ -1
SSR1-210ENST00000489567 SMIM35A0A1B0GVV1 85 aa8.79□□□□□ -1
SSR1-210ENST00000489567 VWA3AA6NCI4 1184 aa8.79□□□□□ -1
SSR1-210ENST00000489567 RSPH10B2B2RC85 870 aa8.79□□□□□ -1
SSR1-210ENST00000489567 LYPLA2O95372 231 aa8.79□□□□□ -1
SSR1-210ENST00000489567 F13A1P00488 732 aa8.79□□□□□ -1
SSR1-210ENST00000489567 RSPH10BP0C881 870 aa8.79□□□□□ -1
SSR1-210ENST00000489567 BECN1Q14457 450 aa8.79□□□□□ -1
SSR1-210ENST00000489567 PDIA5Q14554 519 aa8.79□□□□□ -1
SSR1-210ENST00000489567 TMEM266Q2M3C6 531 aa8.79□□□□□ -1
SSR1-210ENST00000489567 FAM26DQ5JW98 314 aa8.79□□□□□ -1
SSR1-210ENST00000489567 EFCAB12Q6NXP0 572 aa8.79□□□□□ -1
SSR1-210ENST00000489567 POTEGQ6S5H5 508 aa8.79□□□□□ -1
SSR1-210ENST00000489567 DTHD1Q6ZMT9 781 aa8.79□□□□□ -1
SSR1-210ENST00000489567 OTOP2Q7RTS6 562 aa8.79□□□□□ -1
SSR1-210ENST00000489567 TDHQ8IZJ6 230 aa8.79□□□□□ -1
SSR1-210ENST00000489567 METTL13Q8N6R0 699 aa8.79□□□□□ -1
SSR1-210ENST00000489567 CHAMP1Q96JM3 812 aa8.79□□□□□ -1
SSR1-210ENST00000489567 PPP1R16BQ96T49 567 aa8.79□□□□□ -1
SSR1-210ENST00000489567 CDHR5Q9HBB8 845 aa8.79□□□□□ -1
SSR1-210ENST00000489567 CYP26B1Q9NR63 512 aa8.79□□□□□ -1
SSR1-210ENST00000489567 BMP2KQ9NSY1 1161 aaPredicted RBP8.79□□□□□ -1
SSR1-210ENST00000489567 CXXC1Q9P0U4 656 aaPredicted RBP8.79□□□□□ -1
SSR1-210ENST00000489567 TFIP11Q9UBB9 837 aaKnown RBP8.79□□□□□ -1
SSR1-210ENST00000489567 LRWD1Q9UFC0 647 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms