RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 PLA2G4FQ68DD2 849 aa15.89■□□□□ 0.13
CLDN11-209ENST00000489485 CAVIN1Q6NZI2 390 aaKnown RBP15.89■□□□□ 0.13
CLDN11-209ENST00000489485 KCNK18Q7Z418 384 aa15.89■□□□□ 0.13
CLDN11-209ENST00000489485 DIS3LQ8TF46 1054 aaKnown RBP15.89■□□□□ 0.13
CLDN11-209ENST00000489485 BHMT2Q9H2M3 363 aa15.89■□□□□ 0.13
CLDN11-209ENST00000489485 MKI67P46013 3256 aaKnown RBP15.89■□□□□ 0.13
CLDN11-209ENST00000489485 LOXHD1Q8IVV2 1947 aa15.89■□□□□ 0.13
CLDN11-209ENST00000489485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.88■□□□□ 0.13
CLDN11-209ENST00000489485 STBD1O95210 358 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 SSBP05455 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLDN11-209ENST00000489485 INSRRP14616 1297 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 MNX1P50219 401 aaPredicted RBP15.88■□□□□ 0.13
CLDN11-209ENST00000489485 NPEPPSP55786 919 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 IGBP1P78318 339 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 ITGA7Q13683 1181 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 DHX8Q14562 1220 aaKnown RBP15.88■□□□□ 0.13
CLDN11-209ENST00000489485 CAMK4Q16566 473 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 MTERF2Q49AM1 385 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 TMEM119Q4V9L6 283 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 XKR9Q5GH70 373 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 IQUBQ8NA54 791 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 CEP170P1Q96L14 293 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 SERTAD1Q9UHV2 236 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 CCDC85CA6NKD9 419 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 SMIM10L2AP0DMW4 78 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 SMIM10L2BP0DMW5 78 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 XRCC6P12956 609 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLDN11-209ENST00000489485 CAPN2P17655 700 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 PPFIA1Q13136 1202 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 E2F4Q16254 413 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 NAALADL2Q58DX5 795 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 KCTD17Q8N5Z5 321 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 CNNM3Q8NE01 707 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 LRRC15Q8TF66 581 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 PAWRQ96IZ0 340 aaKnown RBP15.88■□□□□ 0.13
CLDN11-209ENST00000489485 CYP26B1Q9NR63 512 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 SETD4Q9NVD3 440 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 TMEM63CQ9P1W3 806 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 HDAC6Q9UBN7 1215 aa15.88■□□□□ 0.13
CLDN11-209ENST00000489485 TRIP12Q14669 1992 aaPredicted RBP15.87■□□□□ 0.13
CLDN11-209ENST00000489485 RARRES1P49788 294 aa15.87■□□□□ 0.13
CLDN11-209ENST00000489485 KRBA2Q6ZNG9 492 aa15.87■□□□□ 0.13
CLDN11-209ENST00000489485 TRAPPC12Q8WVT3 735 aa15.87■□□□□ 0.13
CLDN11-209ENST00000489485 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
CLDN11-209ENST00000489485 PYM1Q9BRP8 204 aaKnown RBP15.87■□□□□ 0.13
CLDN11-209ENST00000489485 NIFKQ9BYG3 293 aaKnown RBP15.87■□□□□ 0.13
CLDN11-209ENST00000489485 ANKEF1Q9NU02 776 aa15.87■□□□□ 0.13
CLDN11-209ENST00000489485 STK17AQ9UEE5 414 aa15.87■□□□□ 0.13
CLDN11-209ENST00000489485 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
CLDN11-209ENST00000489485 NRCAMQ92823 1304 aa15.87■□□□□ 0.13
CLDN11-209ENST00000489485 ARID2Q68CP9 1835 aa15.87■□□□□ 0.13
CLDN11-209ENST00000489485 A0A0U1RQG5 324 aaPredicted RBP15.86■□□□□ 0.13
CLDN11-209ENST00000489485 ARHGEF35A5YM69 484 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 ACTN4O43707 911 aaKnown RBP15.86■□□□□ 0.13
CLDN11-209ENST00000489485 EYA4O95677 639 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 PLA2G4BP0C869 781 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 ATN1P54259 1190 aaPredicted RBP15.86■□□□□ 0.13
CLDN11-209ENST00000489485 GRIK4Q16099 956 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 CEP57L1Q8IYX8 460 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 RAD54LQ92698 747 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 STAMQ92783 540 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
CLDN11-209ENST00000489485 BLOC1S4Q9NUP1 217 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 DBR1Q9UK59 544 aaKnown RBP15.86■□□□□ 0.13
CLDN11-209ENST00000489485 SLFN14P0C7P3 912 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 MCM6Q14566 821 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 ZNF484Q5JVG2 852 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 NFRKBQ6P4R8 1299 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 NECAB2Q7Z6G3 386 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 LMBR1Q8WVP7 490 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 TIGD1Q96MW7 591 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 NUP62CLQ9H1M0 184 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 C11orf49Q9H6J7 331 aa15.86■□□□□ 0.13
CLDN11-209ENST00000489485 EVPLQ92817 2033 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 C17orf102A2RUQ5 167 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 RRN3P2A6NIE6 340 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 ZBTB42B2RXF5 422 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 GNAT1P11488 350 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 COL6A1P12109 1028 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 AFMP43652 599 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 SOX10P56693 466 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 TBC1D8BQ0IIM8 1120 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 GRAMD1CQ8IYS0 662 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 GZF1Q9H116 711 aaPredicted RBP15.85■□□□□ 0.13
CLDN11-209ENST00000489485 GTF2IRD1Q9UHL9 959 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 COL1A2P08123 1366 aa15.85■□□□□ 0.13
CLDN11-209ENST00000489485 ARVCFO00192 962 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 USO1O60763 962 aaKnown RBP15.84■□□□□ 0.13
CLDN11-209ENST00000489485 POLGP54098 1239 aaPredicted RBP15.84■□□□□ 0.13
CLDN11-209ENST00000489485 TARBP2Q15633 366 aaKnown RBP15.84■□□□□ 0.13
CLDN11-209ENST00000489485 PADI6Q6TGC4 694 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 SV2BQ7L1I2 683 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 SYT2Q8N9I0 419 aaPredicted RBP15.84■□□□□ 0.13
CLDN11-209ENST00000489485 SLC7A3Q8WY07 619 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 ERCC4Q92889 916 aaPredicted RBP15.84■□□□□ 0.13
CLDN11-209ENST00000489485 SYAP1Q96A49 352 aaPredicted RBP15.84■□□□□ 0.13
CLDN11-209ENST00000489485 ZBTB10Q96DT7 871 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 TNMDQ9H2S6 317 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 CUEDC2Q9H467 287 aa15.84■□□□□ 0.13
CLDN11-209ENST00000489485 CLSTN2Q9H4D0 955 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms