RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 TRAF5O00463 557 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 TSPAN6O43657 245 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 GAS7O60861 476 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 CLASP2O75122 1294 aaKnown RBP5.77□□□□□ -1.49
XRN1-213ENST00000489241 PLATP00750 562 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 GJA4P35212 333 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 NEK2P51955 445 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 EPHA5P54756 1037 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 NKX3-2P78367 333 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 DSG1Q02413 1049 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 TUSC3Q13454 348 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 LRRC41Q15345 812 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 CR1LQ2VPA4 569 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 BTBD8Q5XKL5 378 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.77□□□□□ -1.49
XRN1-213ENST00000489241 STK32CQ86UX6 486 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 PTRH1Q86Y79 214 aaKnown RBP5.77□□□□□ -1.49
XRN1-213ENST00000489241 LGI4Q8N135 537 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 SMC1BQ8NDV3 1235 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 CLEC4DQ8WXI8 215 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 C8orf48Q96LL4 319 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 RBM15Q96T37 977 aaKnown RBP eCLIP5.77□□□□□ -1.49
XRN1-213ENST00000489241 SMAD5Q99717 465 aaKnown RBP5.77□□□□□ -1.49
XRN1-213ENST00000489241 PDGFDQ9GZP0 370 aaPredicted RBP5.77□□□□□ -1.49
XRN1-213ENST00000489241 SMPD4Q9NXE4 827 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 DTLQ9NZJ0 730 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 B4GALT6Q9UBX8 382 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 SRPK3Q9UPE1 567 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 PTPDC1A2A3K4 754 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 HIP1RO75146 1068 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 MAP4K4O95819 1239 aaPredicted RBP5.76□□□□□ -1.49
XRN1-213ENST00000489241 ADCYAP1R1P41586 468 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 RAB27AP51159 221 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 ADAM9Q13443 819 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 PPP2R5AQ15172 486 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 FIGNQ5HY92 759 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 TTC9BQ8N6N2 239 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 CNTD1Q8N815 330 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 TXNDC5Q8NBS9 432 aaKnown RBP5.76□□□□□ -1.49
XRN1-213ENST00000489241 ARRDC4Q8NCT1 418 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 TTLL11Q8NHH1 800 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 SH3RF2Q8TEC5 729 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 TOE1Q96GM8 510 aaKnown RBP5.76□□□□□ -1.49
XRN1-213ENST00000489241 GPR20Q99678 358 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 BOCQ9BWV1 1114 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 CD244Q9BZW8 370 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 SMURF1Q9HCE7 757 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 GEMIN8Q9NWZ8 242 aaKnown RBP5.76□□□□□ -1.49
XRN1-213ENST00000489241 TRHDEQ9UKU6 1024 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 APOBEC2Q9Y235 224 aaKnown RBP5.76□□□□□ -1.49
XRN1-213ENST00000489241 MYRFQ9Y2G1 1151 aa5.76□□□□□ -1.49
XRN1-213ENST00000489241 CCDC194A0A1B0GVG4 234 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 H7C1D1 291 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 DDX3XO00571 662 aaKnown RBP eCLIP5.75□□□□□ -1.49
XRN1-213ENST00000489241 MAN2B1O00754 1011 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 GABRDO14764 452 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 AKAP10O43572 662 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 FKBP9O95302 570 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 ZNF28P17035 718 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 MECP2P51608 486 aaKnown RBP5.75□□□□□ -1.49
XRN1-213ENST00000489241 TBX4P57082 545 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 IL2P60568 153 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 ADAM17P78536 824 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 ZNF174Q15697 407 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 TBC1D10BQ4KMP7 808 aaPredicted RBP5.75□□□□□ -1.49
XRN1-213ENST00000489241 PAN2Q504Q3 1202 aaKnown RBP5.75□□□□□ -1.49
XRN1-213ENST00000489241 MCTP2Q6DN12 878 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 FKBP9P1Q75LS8 142 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 OTOP1Q7RTM1 612 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 RBM12BQ8IXT5 1001 aaKnown RBP5.75□□□□□ -1.49
XRN1-213ENST00000489241 LCORQ96JN0 433 aaPredicted RBP5.75□□□□□ -1.49
XRN1-213ENST00000489241 RIC8BQ9NVN3 520 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 INVSQ9Y283 1065 aa5.75□□□□□ -1.49
XRN1-213ENST00000489241 SCDO00767 359 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 KCNK3O14649 394 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 PRC1O43663 620 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 KRT37O76014 449 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 PRKD3O94806 890 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 SCGB1D2O95969 90 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 LTFP02788 710 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 INSRRP14616 1297 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 FAHP16930 419 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 PTPN1P18031 435 aaKnown RBP5.74□□□□□ -1.49
XRN1-213ENST00000489241 IRF9Q00978 393 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 OCRLQ01968 901 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 GRIN1Q05586 938 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 SYDE2Q5VT97 1194 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 PRAMEF18Q5VWM3 479 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 PASD1Q8IV76 773 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 WDR75Q8IWA0 830 aaKnown RBP5.74□□□□□ -1.49
XRN1-213ENST00000489241 ZSWIM3Q96MP5 696 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 SAMD11Q96NU1 681 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 CLIC6Q96NY7 704 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 GPR101Q96P66 508 aaPredicted RBP5.74□□□□□ -1.49
XRN1-213ENST00000489241 WRNIP1Q96S55 665 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 HSPBP1Q9NZL4 362 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 TNKSO95271 1327 aa5.74□□□□□ -1.49
XRN1-213ENST00000489241 ARID4BQ4LE39 1312 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms