RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 JADE2Q9NQC1 790 aa18.55■□□□□ 0.56
USP48-210ENST00000489108 RGS18Q9NS28 235 aa18.55■□□□□ 0.56
USP48-210ENST00000489108 PUF60Q9UHX1 559 aaKnown RBP18.55■□□□□ 0.56
USP48-210ENST00000489108 VPS13AQ96RL7 3174 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 DENND3A2RUS2 1198 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 C2CD4DB7Z1M9 353 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 C9IYK1 514 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 RPS6KA5O75582 802 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 ERMP1Q7Z2K6 904 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 FRMD5Q7Z6J6 570 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 CATIPQ7Z7H3 387 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 POMKQ9H5K3 350 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 PSTPIP2Q9H939 334 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 JPH1Q9HDC5 661 aaPredicted RBP18.54■□□□□ 0.56
USP48-210ENST00000489108 ENTPD7Q9NQZ7 604 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 C1orf112Q9NSG2 853 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 SLC9A2Q9UBY0 812 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 ST3GAL5Q9UNP4 418 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 LZTS1Q9Y250 596 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 DCHS1Q96JQ0 3298 aa18.54■□□□□ 0.56
USP48-210ENST00000489108 MAFGO15525 162 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 FGFR1P11362 822 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 DMDP11532 3685 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 LAG3P18627 525 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 KLRC1P26715 233 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 STAT5BP51692 787 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 PLCB3Q01970 1234 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 UBE2SQ16763 222 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 ASTLQ6HA08 431 aaPredicted RBP18.53■□□□□ 0.56
USP48-210ENST00000489108 PLPPR4Q7Z2D5 763 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 TMEM40Q8WWA1 233 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 NKD2Q969F2 451 aaPredicted RBP18.53■□□□□ 0.56
USP48-210ENST00000489108 SPZ1Q9BXG8 430 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 ATP6V0A4Q9HBG4 840 aa18.53■□□□□ 0.56
USP48-210ENST00000489108 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
USP48-210ENST00000489108 EVPLQ92817 2033 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 CYP21A2P08686 494 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 ID4P47928 161 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 ACTR2P61160 394 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 FAM189BP81408 668 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 LRRC55Q6ZSA7 311 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 CHD1LQ86WJ1 897 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 KIAA0319LQ8IZA0 1049 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 ADSSL1Q8N142 457 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 IGDCC4Q8TDY8 1250 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 MYL10Q9BUA6 226 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 ADAM7Q9H2U9 754 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 NGRNQ9NPE2 291 aaKnown RBP18.52■□□□□ 0.56
USP48-210ENST00000489108 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
USP48-210ENST00000489108 TAF6LQ9Y6J9 622 aa18.52■□□□□ 0.56
USP48-210ENST00000489108 ASGR2P07307 311 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 PDE4AP27815 886 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 SART3Q15020 963 aaKnown RBP18.51■□□□□ 0.55
USP48-210ENST00000489108 TPRNQ4KMQ1 711 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 CES5AQ6NT32 575 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 KCNT2Q6UVM3 1135 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 TMC7Q7Z402 723 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 SMC5Q8IY18 1101 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 CASP10Q92851 521 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 KCNH7Q9NS40 1196 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 TMEM161AQ9NX61 479 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 LIMD1Q9UGP4 676 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 PCDHA6Q9UN73 950 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 PCDHA8Q9Y5H6 950 aa18.51■□□□□ 0.55
USP48-210ENST00000489108 GPR182O15218 404 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 WEE2P0C1S8 567 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 SMARCA1P28370 1054 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 PBX3P40426 434 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 ODR4Q5SWX8 454 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 FAM43BQ6ZT52 329 aaPredicted RBP18.5■□□□□ 0.55
USP48-210ENST00000489108 RALYLQ86SE5 291 aaKnown RBP18.5■□□□□ 0.55
USP48-210ENST00000489108 NCOA7Q8NI08 942 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 CYP2W1Q8TAV3 490 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 NECTIN4Q96NY8 510 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 CASD1Q96PB1 797 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 PPP1R16BQ96T49 567 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 HCFC2Q9Y5Z7 792 aa18.5■□□□□ 0.55
USP48-210ENST00000489108 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
USP48-210ENST00000489108 SPDYE3A6NKU9 549 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 E7EWF7 191 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 PLEKHA8P1O95397 391 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 CLCN5P51795 746 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 ANTXR2P58335 489 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 KRT17Q04695 432 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 ITIH3Q06033 890 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 ZNF654Q8IZM8 581 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 CMTR1Q8N1G2 835 aaKnown RBP18.49■□□□□ 0.55
USP48-210ENST00000489108 SRBD1Q8N5C6 995 aaKnown RBP18.49■□□□□ 0.55
USP48-210ENST00000489108 MRPL43Q8N983 215 aaKnown RBP18.49■□□□□ 0.55
USP48-210ENST00000489108 CTCFLQ8NI51 663 aaPredicted RBP18.49■□□□□ 0.55
USP48-210ENST00000489108 MAP3K14Q99558 947 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 MXRA8Q9BRK3 442 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 SDF4Q9BRK5 362 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 TMEM117Q9H0C3 514 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 MFSD1Q9H3U5 465 aa18.49■□□□□ 0.55
USP48-210ENST00000489108 ELAC1Q9H777 363 aaKnown RBP18.49■□□□□ 0.55
USP48-210ENST00000489108 ATG7O95352 703 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 ARP10275 920 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 KIF5BP33176 963 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 NUCB1Q02818 461 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms