RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 FLRT1Q9NZU1 646 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 USO1O60763 962 aaKnown RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 DKC1O60832 514 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 HOXC6P09630 235 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 ADCYAP1R1P41586 468 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 SPATA1Q5VX52 437 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 DHTKD1Q96HY7 919 aaPredicted RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 PCYT2Q99447 389 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 GPR20Q99678 358 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 TRIM5Q9C035 493 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 ARHGAP39Q9C0H5 1083 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 RBM47A0AV96 593 aaKnown RBP12.1□□□□□ -0.47
COL21A1-211ENST00000488912 NOP56O00567 594 aaKnown RBP12.1□□□□□ -0.47
COL21A1-211ENST00000488912 ZNF18P17022 549 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 ATP4AP20648 1035 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 CYP2B6P20813 491 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 CCL14Q16627 93 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 GUF1Q8N442 669 aaKnown RBP12.1□□□□□ -0.47
COL21A1-211ENST00000488912 SOCS4Q8WXH5 440 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 SEPT1Q8WYJ6 367 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 ABHD16BQ9H3Z7 469 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
COL21A1-211ENST00000488912 GJD2Q9UKL4 321 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 ODF2LQ9ULJ1 636 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 COL4A3BPQ9Y5P4 624 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.1□□□□□ -0.47
COL21A1-211ENST00000488912 HIP1RO75146 1068 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 FAM13AO94988 1023 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 RGS2P41220 211 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 PPP1R2P41236 205 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 CASP5P51878 434 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 ZNF131P52739 623 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 HTRA3P83110 453 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 ARHGAP1Q07960 439 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 MAPK7Q13164 816 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 ACVR2BQ13705 512 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 MAEAQ7L5Y9 396 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 DAW1Q8N136 415 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 MSL3Q8N5Y2 521 aaKnown RBP12.1□□□□□ -0.47
COL21A1-211ENST00000488912 P2RX5Q93086 422 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 CEP170P1Q96L14 293 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 PARVGQ9HBI0 331 aa12.1□□□□□ -0.47
COL21A1-211ENST00000488912 ZHX1Q9UKY1 873 aaPredicted RBP12.1□□□□□ -0.47
COL21A1-211ENST00000488912 OATP04181 439 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 GAP43P17677 238 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 CCNE1P24864 410 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 ZNF75DP51815 510 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 LACTBP83111 547 aaPredicted RBP12.09□□□□□ -0.47
COL21A1-211ENST00000488912 XKR3Q5GH77 459 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 TTI2Q6NXR4 508 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 OTUD6AQ7L8S5 288 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
COL21A1-211ENST00000488912 MYOCDQ8IZQ8 938 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 MYCT1Q8N699 235 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 APBA2Q99767 749 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 SEMA6BQ9H3T3 888 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 PSMC4P43686 418 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 STAT5BP51692 787 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 DMTNQ08495 405 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
COL21A1-211ENST00000488912 CDKAL1Q5VV42 579 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 FAM160B1Q5W0V3 765 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 ANKRD40Q6AI12 368 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 AFAP1L1Q8TED9 768 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 SCFD1Q8WVM8 642 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 MRPL44Q9H9J2 332 aaKnown RBP12.09□□□□□ -0.47
COL21A1-211ENST00000488912 CYP26B1Q9NR63 512 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 OLFML3Q9NRN5 406 aa12.09□□□□□ -0.47
COL21A1-211ENST00000488912 BICDL2A1A5D9 508 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 ADCY6O43306 1168 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 GH1P01241 217 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 MYBP10242 640 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 SMPD1P17405 629 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 CYP2C19P33261 490 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 VEGFBP49765 207 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 FCGRTP55899 365 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 FANCCQ00597 558 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 CCDC144BQ3MJ40 725 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 PRAMEF19Q5SWL8 479 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 FIZ1Q96SL8 496 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 DUSP9Q99956 384 aaKnown RBP12.08□□□□□ -0.48
COL21A1-211ENST00000488912 AZI2Q9H6S1 392 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 GPRC5CQ9NQ84 441 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 IFNKQ9P0W0 207 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 CASP8AP2Q9UKL3 1982 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 LGR5O75473 907 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 CAP1Q01518 475 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
COL21A1-211ENST00000488912 MTERF2Q49AM1 385 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms