RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 MMP3P08254 477 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 CST5P28325 142 aaPredicted RBP11.89□□□□□ -0.51
USP11-209ENST00000488848 HOXC8P31273 242 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 CYP2C19P33261 490 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 RFC5P40937 340 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 STAT5BP51692 787 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 GJA9P57773 515 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 ASIC1P78348 528 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 ZRSR1Q15695 479 aaKnown RBP11.89□□□□□ -0.51
USP11-209ENST00000488848 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 ANO6Q4KMQ2 910 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 SWSAP1Q6NVH7 229 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 CCDC65Q8IXS2 484 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 DAW1Q8N136 415 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 ADSSL1Q8N142 457 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 GUF1Q8N442 669 aaKnown RBP11.89□□□□□ -0.51
USP11-209ENST00000488848 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 SLC17A8Q8NDX2 589 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 MCPH1Q8NEM0 835 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 TRPV1Q8NER1 839 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 PIGOQ8TEQ8 1089 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 CCDC47Q96A33 483 aaKnown RBP11.89□□□□□ -0.51
USP11-209ENST00000488848 UIMC1Q96RL1 719 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 FIZ1Q96SL8 496 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 PLIN2Q99541 437 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 REEP2Q9BRK0 252 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 C16orf70Q9BSU1 422 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 STRA6Q9BX79 667 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 DHX33Q9H6R0 707 aaKnown RBP11.89□□□□□ -0.51
USP11-209ENST00000488848 AZI2Q9H6S1 392 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 CYP26B1Q9NR63 512 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 ERAP1Q9NZ08 941 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 ZHX1Q9UKY1 873 aaPredicted RBP11.89□□□□□ -0.51
USP11-209ENST00000488848 COL4A3BPQ9Y5P4 624 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 SIP14410 1827 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 FRMPD3Q5JV73 1810 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 ARHGEF35A5YM69 484 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 PPP1R3GB7ZBB8 358 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 PPP1R37O75864 691 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 LGALS2P05162 132 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 CASP1P29466 404 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 ABCD1P33897 745 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 ZNF165P49910 485 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 COASYQ13057 564 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 ALCAMQ13740 583 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 TMEM63BQ5T3F8 832 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 PADI6Q6TGC4 694 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 C11orf57Q6ZUT1 292 aaPredicted RBP11.88□□□□□ -0.51
USP11-209ENST00000488848 EPM2AIP1Q7L775 607 aaPredicted RBP11.88□□□□□ -0.51
USP11-209ENST00000488848 KIAA0895Q8NCT3 520 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 ENOX1Q8TC92 643 aaKnown RBP11.88□□□□□ -0.51
USP11-209ENST00000488848 STAMQ92783 540 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
USP11-209ENST00000488848 COPS5Q92905 334 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 NTPCRQ9BSD7 190 aaKnown RBP11.88□□□□□ -0.51
USP11-209ENST00000488848 BLZF1Q9H2G9 400 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 KCNG1Q9UIX4 513 aa11.88□□□□□ -0.51
USP11-209ENST00000488848 HAS3O00219 553 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 BACH1O14867 736 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 ZBTB39O15060 712 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 EIF3DO15371 548 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP11-209ENST00000488848 HBP1O60381 514 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 KPNA6O60684 536 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 CPT1AP50416 773 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 NCAPHQ15003 741 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 PLCB4Q15147 1175 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 DGKDQ16760 1214 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 FAM26FQ5R3K3 315 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 TLK2Q86UE8 772 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 AFG1LQ8WV93 481 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 SPIRE2Q8WWL2 714 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 KIFAP3Q92845 792 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
USP11-209ENST00000488848 DRC1Q96MC2 740 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 JPH2Q9BR39 696 aaPredicted RBP11.87□□□□□ -0.51
USP11-209ENST00000488848 DNAJC25Q9H1X3 360 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 PARVGQ9HBI0 331 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 XPNPEP1Q9NQW7 623 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 NRBP2Q9NSY0 501 aa11.87□□□□□ -0.51
USP11-209ENST00000488848 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
USP11-209ENST00000488848 GOLGA6L3A6NEY3 463 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 ADCY3O60266 1144 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 MSCO60682 206 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 ADAMTS4O75173 837 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
USP11-209ENST00000488848 MAFO75444 373 aaPredicted RBP11.86□□□□□ -0.51
USP11-209ENST00000488848 KIF20AO95235 890 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 MRE11P49959 708 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 CACNB2Q08289 660 aaPredicted RBP11.86□□□□□ -0.51
USP11-209ENST00000488848 STK4Q13043 487 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 NFIL3Q16649 462 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 ZCWPW2Q504Y3 356 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
USP11-209ENST00000488848 ZNF484Q5JVG2 852 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms