RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZMAT1Q5H9K5 638 aa6.65□□□□□ -1.34
SMC4-219ENST00000487747 TRIM68Q6AZZ1 485 aa6.65□□□□□ -1.34
SMC4-219ENST00000487747 ABHD17CQ6PCB6 329 aa6.65□□□□□ -1.34
SMC4-219ENST00000487747 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.34
SMC4-219ENST00000487747 DEPDC7Q96QD5 511 aa6.65□□□□□ -1.34
SMC4-219ENST00000487747 BTBD2Q9BX70 525 aa6.65□□□□□ -1.34
SMC4-219ENST00000487747 PCED1AQ9H1Q7 454 aa6.65□□□□□ -1.34
SMC4-219ENST00000487747 C12orf65Q9H3J6 166 aaKnown RBP6.65□□□□□ -1.34
SMC4-219ENST00000487747 PRAMEF22A3QJZ6 481 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 NPIPB8E9PQR5 432 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 CYR61O00622 381 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 ARHGAP6O43182 974 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 SUV39H1O43463 412 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 NAT1P18440 290 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 HMGA2P52926 109 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 DGCR2P98153 550 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 FOXE3Q13461 319 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 USP39Q53GS9 565 aaKnown RBP6.64□□□□□ -1.35
SMC4-219ENST00000487747 RNF207Q6ZRF8 634 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 CXXC5Q7LFL8 322 aaKnown RBP6.64□□□□□ -1.35
SMC4-219ENST00000487747 OTOP2Q7RTS6 562 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 OVCH1Q7RTY7 1134 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 FGD2Q7Z6J4 655 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 EDAQ92838 391 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 SCYL1Q96KG9 808 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 ZNF341Q9BYN7 854 aa6.64□□□□□ -1.35
SMC4-219ENST00000487747 MRE11P49959 708 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 STAT5BP51692 787 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 KRTAP1-1Q07627 177 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 FOXL1Q12952 345 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 MOGSQ13724 837 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 NFYCQ13952 458 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 NRN1LQ496H8 165 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 USP30Q70CQ3 517 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 ZNF503Q96F45 646 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 GBP4Q96PP9 640 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 CELF4Q9BZC1 486 aaKnown RBP6.63□□□□□ -1.35
SMC4-219ENST00000487747 OR10A5Q9H207 317 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 SLC30A1Q9Y6M5 507 aa6.63□□□□□ -1.35
SMC4-219ENST00000487747 RBL2Q08999 1139 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 TRIM61Q5EBN2 209 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 TMEM200BQ69YZ2 307 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 MAMDC4Q6UXC1 1216 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 GPR135Q8IZ08 494 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 ZNF808Q8N4W9 903 aaPredicted RBP6.62□□□□□ -1.35
SMC4-219ENST00000487747 OR14K1Q8NGZ2 314 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 DLG3Q92796 817 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 MAGEB10Q96LZ2 347 aaPredicted RBP6.62□□□□□ -1.35
SMC4-219ENST00000487747 KCNH7Q9NS40 1196 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 B3GALT1Q9Y5Z6 326 aa6.62□□□□□ -1.35
SMC4-219ENST00000487747 A0A0G2JNJ9 132 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 TCRBV16S1A1N1A0A5B0 115 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 FOXP2O15409 715 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 TMEM132BQ14DG7 1078 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 MIIPQ5JXC2 388 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 BRAPQ7Z569 592 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 BCL6BQ8N143 479 aaPredicted RBP6.61□□□□□ -1.35
SMC4-219ENST00000487747 HIRIP3Q9BW71 556 aaPredicted RBP6.61□□□□□ -1.35
SMC4-219ENST00000487747 AGO3Q9H9G7 860 aaKnown RBP6.61□□□□□ -1.35
SMC4-219ENST00000487747 Q9UFV3 132 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 PUF60Q9UHX1 559 aaKnown RBP6.61□□□□□ -1.35
SMC4-219ENST00000487747 FBXO10Q9UK96 956 aa6.61□□□□□ -1.35
SMC4-219ENST00000487747 GOLGA6L22H0YM25 854 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 EFCAB14O75071 495 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 HGFACQ04756 655 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 ACAP1Q15027 740 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 POLNQ7Z5Q5 900 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 JMYQ8N9B5 988 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 IGSF22Q8N9C0 903 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 HIPK4Q8NE63 616 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 IL17DQ8TAD2 202 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 SRPK1Q96SB4 655 aaKnown RBP6.6□□□□□ -1.35
SMC4-219ENST00000487747 OR10A2Q9H208 303 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 HECAQ9UBI9 543 aaPredicted RBP6.6□□□□□ -1.35
SMC4-219ENST00000487747 SFMBT1Q9UHJ3 866 aa6.6□□□□□ -1.35
SMC4-219ENST00000487747 C1SP09871 688 aa6.59□□□□□ -1.35
SMC4-219ENST00000487747 ZBTB48P10074 688 aaPredicted RBP6.59□□□□□ -1.35
SMC4-219ENST00000487747 MSX2P35548 267 aaPredicted RBP6.59□□□□□ -1.35
SMC4-219ENST00000487747 STAT3P40763 770 aa6.59□□□□□ -1.35
SMC4-219ENST00000487747 GRAMD4Q6IC98 578 aa6.59□□□□□ -1.35
SMC4-219ENST00000487747 LRP10Q7Z4F1 713 aa6.59□□□□□ -1.35
SMC4-219ENST00000487747 ERCC4Q92889 916 aaPredicted RBP6.59□□□□□ -1.35
SMC4-219ENST00000487747 FOXRED1Q96CU9 486 aaPredicted RBP6.59□□□□□ -1.35
SMC4-219ENST00000487747 TRIM39Q9HCM9 518 aa6.59□□□□□ -1.35
SMC4-219ENST00000487747 PLA2G3Q9NZ20 509 aa6.59□□□□□ -1.35
SMC4-219ENST00000487747 MAGEL2Q9UJ55 1249 aa6.59□□□□□ -1.35
SMC4-219ENST00000487747 SLC12A8A0AV02 714 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 KCNQ2O43526 872 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 SDHAP31040 664 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 MEOX1P50221 254 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 TMEM177Q53S58 311 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 ZC3H12BQ5HYM0 836 aaKnown RBP6.58□□□□□ -1.36
SMC4-219ENST00000487747 USP51Q70EK9 711 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 C1orf210Q8IVY1 113 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 RTKN2Q8IZC4 609 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 LILRB2Q8N423 598 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 TMEM176AQ96HP8 235 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 C8orf37Q96NL8 207 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 FAM184BQ9ULE4 1060 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms