RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 GRIA2P42262 883 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 TUBA3CQ13748 450 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 YOD1Q5VVQ6 348 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 STYK1Q6J9G0 422 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 TUBA3EQ6PEY2 450 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 LDLRAD3Q86YD5 345 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 IFNL3Q8IZI9 196 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 ZCRB1Q8TBF4 217 aaKnown RBP5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 ZG16BQ96DA0 208 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 EXOC2Q96KP1 924 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 KCNJ15Q99712 375 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 PHF20Q9BVI0 1012 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 SLC39A2Q9NP94 309 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 GPR27Q9NS67 375 aa5.34□□□□□ -1.55
HMGB1P36-201ENST00000487709 CADPSQ9ULU8 1353 aa5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 GSTA4O15217 222 aa5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 NKRFO15226 690 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 IBSPP21815 317 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 GRK2P25098 689 aa5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 GRK3P35626 688 aa5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 KIZQ2M2Z5 673 aa5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 FNDC7Q5VTL7 733 aa5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 KIAA0907Q7Z7F0 614 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 UHMK1Q8TAS1 419 aaKnown RBP5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 LARP4BQ92615 738 aaKnown RBP5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 MFSD3Q96ES6 412 aa5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 MAGEB10Q96LZ2 347 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 CRAMP1Q96RY5 1269 aa5.33□□□□□ -1.56
HMGB1P36-201ENST00000487709 LOC105371045A0A1W2PR82 267 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 ANKRD62A6NC57 917 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 RFPL3O75679 317 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 GPR85P60893 370 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 SPIRE1Q08AE8 756 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 TOP3AQ13472 1001 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 ZMAT1Q5H9K5 638 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 EGFLAMQ63HQ2 1017 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 MAMDC4Q6UXC1 1216 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 NIM1KQ8IY84 436 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 ZNF483Q8TF39 744 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 NINJ1Q92982 152 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 TLR9Q9NR96 1032 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 MAGEC2Q9UBF1 373 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 DSEQ9UL01 958 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 NUB1Q9Y5A7 615 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 CD2APQ9Y5K6 639 aa5.32□□□□□ -1.56
HMGB1P36-201ENST00000487709 MATN2O00339 956 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 CUTAO60888 179 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 RAPGEF3O95398 923 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 HIBADHP31937 336 aaKnown RBP5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 MSX2P35548 267 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 GUCY1A3Q02108 690 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 DUSP8Q13202 625 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 PABPC4Q13310 644 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 TRIM61Q5EBN2 209 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 FAM47CQ5HY64 1035 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 CT47A1Q5JQC4 288 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 FOXB2Q5VYV0 432 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 EP400NLQ6ZTU2 488 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 KIAA1683Q9H0B3 1180 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 KANSL2Q9H9L4 492 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 SPC25Q9HBM1 224 aa5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 INTS7Q9NVH2 962 aaKnown RBP5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 REXO2Q9Y3B8 237 aaKnown RBP5.31□□□□□ -1.56
HMGB1P36-201ENST00000487709 ACOT7O00154 380 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 OPA1O60313 960 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 DNAJC6O75061 913 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 ASLP04424 464 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 CAPNS1P04632 268 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 MAKP20794 623 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 IGFALSP35858 605 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 FOXL1Q12952 345 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 PAK1Q13153 545 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 TBR1Q16650 682 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 UBE2R2Q712K3 238 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 KCTD1Q719H9 257 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 ZNF627Q7L945 461 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 MRGPRGQ86SM5 289 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 DDX53Q86TM3 631 aaKnown RBP5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 ZC3H7AQ8IWR0 971 aaKnown RBP5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 AHI1Q8N157 1196 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 PPM1KQ8N3J5 372 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 CLIP3Q96DZ5 547 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 AGAP2Q99490 1192 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 CD244Q9BZW8 370 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 PUF60Q9UHX1 559 aaKnown RBP5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 TNFRSF18Q9Y5U5 241 aa5.3□□□□□ -1.56
HMGB1P36-201ENST00000487709 BLACEA4D250 179 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 FAM47E-STBD1D6RA91 191 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 CPEP16870 476 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 SOX5P35711 763 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 ADCY8P40145 1251 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 ETV4P43268 484 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 KCNQ1P51787 676 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 GYS2P54840 703 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 ST5P78524 1137 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 WDR72Q3MJ13 1102 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms