RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 GARTP22102 1010 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 ZEB1P37275 1124 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 PHKA1P46020 1223 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 RHBDL3P58872 404 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 FAM160A1Q05DH4 1040 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 PWP1Q13610 501 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 IFI16Q16666 785 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 ATP2B3Q16720 1220 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 ALDH1L2Q3SY69 923 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 PRAMEF13Q5VWM6 474 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 FAM109BQ6ICB4 259 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 METTL16Q86W50 562 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 STK11IPQ8N1F8 1099 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 MIPEPQ99797 713 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 TNKS2Q9H2K2 1166 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 DDX4Q9NQI0 724 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 STAP2Q9UGK3 403 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 GTF2IRD1Q9UHL9 959 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 HDAC5Q9UQL6 1122 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 SLC5A6Q9Y289 635 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 LRRFIP2Q9Y608 721 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 MYH2Q9UKX2 1941 aa6.29□□□□□ -1.4
R3HDM1-218ENST00000487294 MROH7-TTC4A0A0A0MT08 1334 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 TRIM75PA6NK02 468 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 BIN1O00499 593 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 PAPLNO95428 1278 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 ITIH2P19823 946 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 HOXA7P31268 230 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 PRKCQQ04759 706 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 PABPC4Q13310 644 aaKnown RBP eCLIP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 RASGRF1Q13972 1273 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 TREML2Q5T2D2 321 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 SPTY2D1Q68D10 685 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 TDHQ8IZJ6 230 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 ANKRD13CQ8N6S4 541 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 GOLM1Q8NBJ4 401 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 DIS3LQ8TF46 1054 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 ZNF384Q8TF68 577 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 SSH1Q8WYL5 1049 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 USP6NLQ92738 828 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 ACSF2Q96CM8 615 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 MISP3Q96FF7 219 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 DPH2Q9BQC3 489 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 GINM1Q9NU53 330 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 MTMR10Q9NXD2 777 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 HERC5Q9UII4 1024 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 VAV3Q9UKW4 847 aa6.28□□□□□ -1.4
R3HDM1-218ENST00000487294 PLXNB2O15031 1838 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 E9PSI1 815 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 CT47B1P0C2W7 299 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 CD8BP10966 210 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 CD96P40200 585 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 MECOMQ03112 1051 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 PDE4BQ07343 736 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 SPP2Q13103 211 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 MTX1Q13505 466 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 NKPD1Q17RQ9 610 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 SLC6A19Q695T7 634 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 LETMD1Q6P1Q0 360 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 FBXL19Q6PCT2 694 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 GADL1Q6ZQY3 521 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 DZIP1Q86YF9 867 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 SPACA3Q8IXA5 215 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 DEFB123Q8N688 67 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 SOCS4Q8WXH5 440 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 TMEM87BQ96K49 555 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 ASCC2Q9H1I8 757 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 C11orf49Q9H6J7 331 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 PRDM5Q9NQX1 630 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 ADAM30Q9UKF2 790 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 TPX2Q9ULW0 747 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 MAPK8IP1Q9UQF2 711 aa6.27□□□□□ -1.41
R3HDM1-218ENST00000487294 PFASO15067 1338 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 VCANP13611 3396 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 LAMA2P24043 3122 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 DDX60LQ5H9U9 1706 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 TMEM265A0A087WTH1 108 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 PRR33A8MZF0 331 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 C19orf81C9J6K1 198 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 BPNT1O95861 308 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 LDHCP07864 332 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 UBTFL1P0CB47 393 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 BTDP43251 543 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 MAGEA10P43363 369 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 BACE1P56817 501 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 GSTO1P78417 241 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 MVPQ14764 893 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 SNAP47Q5SQN1 464 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 TRMT2AQ8IZ69 625 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 TMEM87AQ8NBN3 555 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 FBXO27Q8NI29 283 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 TRIB2Q92519 343 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 NSUN4Q96CB9 384 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 HRASLS5Q96KN8 279 aa6.26□□□□□ -1.41
R3HDM1-218ENST00000487294 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms