RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 OSBPL7Q9BZF2 842 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 IL23AQ9NPF7 189 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 SETD4Q9NVD3 440 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 CXXC1Q9P0U4 656 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-209ENST00000487244 CDH23Q9H251 3354 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 EMSYQ7Z589 1322 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 C17orf102A2RUQ5 167 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 GRXCR1A8MXD5 290 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 MSH4O15457 936 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 MAFGO15525 162 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 SLC37A4O43826 429 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 LGR5O75473 907 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 CKBP12277 381 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 ADAM17P78536 824 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 SETQ01105 290 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-209ENST00000487244 PTK7Q13308 1070 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 ZNF618Q5T7W0 954 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 RASIP1Q5U651 963 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 MCTP2Q6DN12 878 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 RUFY4Q6ZNE9 571 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 LRRC8DQ7L1W4 858 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 OTOP2Q7RTS6 562 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 CCDC60Q8IWA6 550 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-209ENST00000487244 TRAPPC12Q8WVT3 735 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 GLG1Q92896 1179 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 TNFRSF25Q93038 417 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 ATP6V0A1Q93050 837 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 HLA-CQ95604 372 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 ZNF577Q9BSK1 485 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 PRKD2Q9BZL6 878 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 ZNF215Q9UL58 517 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-209ENST00000487244 EYSQ5T1H1 3165 aa8.12□□□□□ -1.11
UBE4B-209ENST00000487244 IGKV6D-21A0A0A0MT36 114 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 CCDC194A0A1B0GVG4 234 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 WNT7AO00755 349 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 NBNO60934 754 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 ATG7O95352 703 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 CTSHP09668 335 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 SELPP16109 830 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 ATP4AP20648 1035 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 THPOP40225 353 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 USP11P51784 963 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 IGBP1P78318 339 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 GUCY1B3Q02153 619 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 RBL2Q08999 1139 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 PPFIA1Q13136 1202 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 BFSP2Q13515 415 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 PLCB4Q15147 1175 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 NONOQ15233 471 aaKnown RBP eCLIP8.11□□□□□ -1.11
UBE4B-209ENST00000487244 RABEP1Q15276 862 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 GRIK4Q16099 956 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 UGCGQ16739 394 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 MARCH8Q5T0T0 291 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 GALNT17Q6IS24 598 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 PSRC1Q6PGN9 363 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-209ENST00000487244 ABHD15Q6UXT9 468 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 RNF19BQ6ZMZ0 732 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 PIK3AP1Q6ZUJ8 805 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 KRT25Q7Z3Z0 450 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 FAM177A1Q8N128 213 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-209ENST00000487244 FAM160A2Q8N612 972 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-209ENST00000487244 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 ETNPPLQ8TBG4 499 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 CAGE1Q8TC20 777 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 AFAP1L1Q8TED9 768 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 HERVK_113Q902F9 699 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 WASF1Q92558 559 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 SMARCAD1Q9H4L7 1026 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 ERAP1Q9NZ08 941 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 TRANK1O15050 2925 aa8.11□□□□□ -1.11
UBE4B-209ENST00000487244 ARID2Q68CP9 1835 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 PRUNE2Q8WUY3 3088 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 CYP3A7-CYP3A51PA0A087WV96 503 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 MBLAC1A4D2B0 266 aaPredicted RBP8.1□□□□□ -1.11
UBE4B-209ENST00000487244 BTBD18B2RXH4 712 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 BACH1O14867 736 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 CHMP2AO43633 222 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 GAS7O60861 476 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 FGBP02675 491 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 MMP1P03956 469 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 INSRRP14616 1297 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 XBP1P17861 261 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 CYP3A7P24462 503 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 KRT2P35908 639 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 STAT5BP51692 787 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 GUCA2AQ02747 115 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 LETM2Q2VYF4 491 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 Q4G0T1 1027 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 LRCH2Q5VUJ6 765 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 KRT40Q6A162 431 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
UBE4B-209ENST00000487244 SWSAP1Q6NVH7 229 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 TRMT1LQ7Z2T5 733 aaKnown RBP8.1□□□□□ -1.11
UBE4B-209ENST00000487244 CCDC155Q8N6L0 562 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 SLC5A5Q92911 643 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 FAM161BQ96MY7 647 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 MBOAT7Q96N66 472 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 USB1Q9BQ65 265 aaKnown RBP8.1□□□□□ -1.11
UBE4B-209ENST00000487244 BACH2Q9BYV9 841 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 UNC45AQ9H3U1 944 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms