RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 E2F7Q96AV8 911 aa6.58□□□□□ -1.36
PRPF38A-203ENST00000487160 DDX11Q96FC9 970 aa6.58□□□□□ -1.36
PRPF38A-203ENST00000487160 MAML3Q96JK9 1138 aa6.58□□□□□ -1.36
PRPF38A-203ENST00000487160 MYL10Q9BUA6 226 aa6.58□□□□□ -1.36
PRPF38A-203ENST00000487160 CCM2LQ9NUG4 571 aaPredicted RBP6.58□□□□□ -1.36
PRPF38A-203ENST00000487160 NOB1Q9ULX3 412 aaKnown RBP6.58□□□□□ -1.36
PRPF38A-203ENST00000487160 WASF3Q9UPY6 502 aa6.58□□□□□ -1.36
PRPF38A-203ENST00000487160 PRSS38A1L453 326 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 XPOTO43592 962 aaKnown RBP6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 PRPF6O94906 941 aaKnown RBP6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 PRLP01236 227 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 ENO2P09104 434 aaPredicted RBP6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 ENPP1P22413 925 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 RECQLP46063 649 aaPredicted RBP6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 NKX3-2P78367 333 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 PFKPQ01813 784 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 SLC6A3Q01959 620 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 FSCN1Q16658 493 aaKnown RBP6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 ZBTB41Q5SVQ8 909 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 PRAMEF9Q5VWM5 478 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 OLFML2BQ68BL8 750 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 TIGD7Q6NT04 549 aaPredicted RBP6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 CCDC62Q6P9F0 684 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 MYO1HQ8N1T3 1032 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 EAF2Q96CJ1 260 aaPredicted RBP6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 LIN37Q96GY3 246 aaPredicted RBP6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 ORAI2Q96SN7 254 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 AMNQ9BXJ7 453 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 DNAJC28Q9NX36 388 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 EDARQ9UNE0 448 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 PPP2R3BQ9Y5P8 575 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 MRFAP1Q9Y605 127 aa6.57□□□□□ -1.36
PRPF38A-203ENST00000487160 KLHL33A6NCF5 533 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 ZNF503-AS2A6NEH8 195 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 ZNF839A8K0R7 811 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 PAPLNO95428 1278 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 NCAM1P13591 858 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 FBLN1P23142 703 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 RGS3P49796 1198 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 KRT85P78386 507 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 SRSF3P84103 164 aaKnown RBP6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 ALDH6A1Q02252 535 aaKnown RBP6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 MYBPC3Q14896 1274 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 ACAP2Q15057 778 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 UGT8Q16880 541 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 TOR2AQ5JU69 321 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 LRSAM1Q6UWE0 723 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 MPZL3Q6UWV2 235 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 UNQ6494/PRO21346Q6UXR6 183 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 TMC5Q6UXY8 1006 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 LIPIQ6XZB0 460 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 TTLL7Q6ZT98 887 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 C14orf80Q86SX3 495 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 ZC3H18Q86VM9 953 aaKnown RBP6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 CPA6Q8N4T0 437 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 CPA5Q8WXQ8 436 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 FERMT2Q96AC1 680 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 C8orf48Q96LL4 319 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 CAMKK2Q96RR4 588 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 FOXB1Q99853 325 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 SYT3Q9BQG1 590 aa6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 NGRNQ9NPE2 291 aaKnown RBP6.56□□□□□ -1.36
PRPF38A-203ENST00000487160 HRKO00198 91 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 PRPF3O43395 683 aaKnown RBP6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 LPLP06858 475 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 C8BP07358 591 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 CT47B1P0C2W7 299 aaPredicted RBP6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 MC3RP41968 323 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 NCKAP1LP55160 1127 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 SRSF2Q01130 221 aaKnown RBP6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 ROM1Q03395 351 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 CACNB2Q08289 660 aaPredicted RBP6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 ADCY2Q08462 1091 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 PITRM1Q5JRX3 1037 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 FAM102BQ5T8I3 360 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 VASNQ6EMK4 673 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 SLFN12LQ6IEE8 588 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 FAM168AQ92567 244 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 QRSL1Q9H0R6 528 aaKnown RBP6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 TCF7L1Q9HCS4 588 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 INCENPQ9NQS7 918 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 SIRT5Q9NXA8 310 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 GALNT8Q9NY28 637 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 EIF4G1Q04637 1599 aaKnown RBP6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 MYO15BQ96JP2 1530 aa6.55□□□□□ -1.36
PRPF38A-203ENST00000487160 IRS2Q9Y4H2 1338 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 RFPL1O75677 317 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 PF4V1P10720 104 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 ATF2P15336 505 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 HTRA3P83110 453 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 NOLC1Q14978 699 aaKnown RBP eCLIP6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 TMEM240Q5SV17 173 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 EFCAB2Q5VUJ9 269 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 KANSL1Q7Z3B3 1105 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 LDHDQ86WU2 507 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 TPH2Q8IWU9 490 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 CMTR2Q8IYT2 770 aaKnown RBP6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 CALML6Q8TD86 181 aa6.54□□□□□ -1.36
PRPF38A-203ENST00000487160 IGDCC4Q8TDY8 1250 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms