RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DCAF17Q5H9S7 520 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 CCDC181Q5TID7 509 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 IRF2BP2Q7Z5L9 587 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 LARGE2Q8N3Y3 721 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 WDR11Q9BZH6 1224 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 POLD4Q9HCU8 107 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 ADAMTS1Q9UHI8 967 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 FEM1BQ9UK73 627 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 FBXL5Q9UKA1 691 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 BZW2Q9Y6E2 419 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 ZMYM2Q9UBW7 1377 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 FRMPD4Q14CM0 1322 aa19.71■□□□□ 0.75
PDLIM7-207ENST00000486828 SFI1A8K8P3 1242 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 N4BP1O75113 896 aaKnown RBP19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 KLRC1P26715 233 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 CXCR5P32302 372 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 PAFAH1B1P43034 410 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 UBXN2AP68543 259 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 SETQ01105 290 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 ZYXQ15942 572 aaKnown RBP19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 MYCT1Q8N699 235 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 FAM71BQ8TC56 605 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 SLC35C1Q96A29 364 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 EXOC4Q96A65 974 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 SPAG5Q96R06 1193 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 PARVGQ9HBI0 331 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 VEZTQ9HBM0 779 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 SEL1LQ9UBV2 794 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 ADAM21Q9UKJ8 722 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 CLIC2O15247 247 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 PALMO75781 387 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 ZMYND10O75800 440 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 CAP2P40123 477 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 TNNT3P45378 269 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 KIAA0753Q2KHM9 967 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 HSP90B2PQ58FF3 399 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 C10orf76Q5T2E6 689 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 TCERG1LQ5VWI1 586 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 GBP6Q6ZN66 633 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 BORCS6Q96GS4 357 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 PSMB7Q99436 277 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 ZNF577Q9BSK1 485 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 TMEM39BQ9GZU3 492 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 MED4Q9NPJ6 270 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 PSD3Q9NYI0 1048 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 RNF14Q9UBS8 474 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 BCS1LQ9Y276 419 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 ZBTB12Q9Y330 459 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 PCDHGC5Q9Y5F6 944 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 COL4A5P29400 1685 aa19.7■□□□□ 0.74
PDLIM7-207ENST00000486828 UBE4BO95155 1302 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 GTPBP10A4D1E9 387 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 ERICH4A6NGS2 130 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 BTNL10A8MVZ5 291 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 NMT1P30419 496 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 AARSP49588 968 aaKnown RBP eCLIP19.69■□□□□ 0.744e-9■■□□□ 11.9
PDLIM7-207ENST00000486828 GYS2P54840 703 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 ENOX2Q16206 610 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 LDHDQ86WU2 507 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 CDAN1Q8IWY9 1227 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 MTMR14Q8NCE2 650 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 CCDC102AQ96A19 550 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 NACC1Q96RE7 527 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 LRRC1Q9BTT6 524 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 DEFB129Q9H1M3 183 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 UNC45AQ9H3U1 944 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 SIX2Q9NPC8 291 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 KCND2Q9NZV8 630 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 VPS18Q9P253 973 aa19.69■□□□□ 0.74
PDLIM7-207ENST00000486828 SHTN1A0MZ66 631 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 CCDC66A2RUB6 948 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 ZBTB39O15060 712 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 MYBL2P10244 700 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 ARP10275 920 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 PRKCIP41743 596 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 ZNF131P52739 623 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 PTK2Q05397 1052 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 B3GNT9Q6UX72 402 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 ZNF571Q7Z3V5 609 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 FAM83AQ86UY5 434 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 TEKT3Q9BXF9 490 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 PACSIN1Q9BY11 444 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 ZNF277Q9NRM2 450 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 ODF2LQ9ULJ1 636 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 HPCAL4Q9UM19 191 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 PCDHB13Q9Y5F0 798 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 MIGA2Q7L4E1 593 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 FIZ1Q96SL8 496 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 FBXO28Q9NVF7 368 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 SMARCAL1Q9NZC9 954 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 EHD2Q9NZN4 543 aa19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 WRAP73Q9P2S5 460 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-207ENST00000486828 ANXA13P27216 316 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 PSMC2P35998 433 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 JAM2P57087 298 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 CFAP221Q4G0U5 840 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 ZC2HC1CQ53FD0 456 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 MEI1Q5TIA1 1274 aa19.67■□□□□ 0.74
PDLIM7-207ENST00000486828 GSPT2Q8IYD1 628 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms