RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TTYH1Q9H313 450 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-229ENST00000486665 SMARCAD1Q9H4L7 1026 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 AZI2Q9H6S1 392 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 CCDC39Q9UFE4 941 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 IGSF9BQ9UPX0 1349 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 TMEM150BA6NC51 233 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 NR1I2O75469 434 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 LYPLA2O95372 231 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 MARK3P27448 753 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 CST5P28325 142 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-229ENST00000486665 SYKP43405 635 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 PLCB4Q15147 1175 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 E2F4Q16254 413 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 LONRF3Q496Y0 759 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 BRDTQ58F21 947 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-229ENST00000486665 CCDC73Q6ZRK6 1079 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC6-229ENST00000486665 C4orf19Q8IY42 314 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 RASSF8Q8NHQ8 419 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 PPP1R13LQ8WUF5 828 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 ATP6V0A1Q93050 837 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 DHX58Q96C10 678 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 CDK5RAP3Q96JB5 506 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 CDX2Q99626 313 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-229ENST00000486665 RNPEPQ9H4A4 650 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 BLOC1S4Q9NUP1 217 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 SERTAD1Q9UHV2 236 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
HDAC6-229ENST00000486665 KDM3AQ9Y4C1 1321 aa14.27□□□□□ -0.12
HDAC6-229ENST00000486665 H3BRB1 525 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 KPNA6O60684 536 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 ZNF202O95125 648 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 ASGR1P07306 291 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 MUTP22033 750 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 PURAQ00577 322 aaKnown RBP14.27□□□□□ -0.13
HDAC6-229ENST00000486665 PRKCEQ02156 737 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 FAM160A1Q05DH4 1040 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 ZNF697Q5TEC3 545 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 C1orf53Q5VUE5 145 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 CXCL17Q6UXB2 119 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 ANO5Q75V66 913 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 RNF180Q86T96 592 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 CKAP2LQ8IYA6 745 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 NACC1Q96RE7 527 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 SH2D3AQ9BRG2 576 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 NT5C3AQ9H0P0 336 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 SEMA6BQ9H3T3 888 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 TUT1Q9H6E5 874 aaKnown RBP14.27□□□□□ -0.13
HDAC6-229ENST00000486665 DNM3Q9UQ16 869 aa14.27□□□□□ -0.13
HDAC6-229ENST00000486665 A0A1W2PQ45 241 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-229ENST00000486665 A0A1W2PQY0 241 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 HAS3O00219 553 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 ACTN4O43707 911 aaKnown RBP14.26□□□□□ -0.13
HDAC6-229ENST00000486665 ZEB2O60315 1214 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 DKC1O60832 514 aaKnown RBP eCLIP14.26□□□□□ -0.133e-10■■■■■ 48.8
HDAC6-229ENST00000486665 F2P00734 622 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 OATP04181 439 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 XRCC6P12956 609 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC6-229ENST00000486665 YWHABP31946 246 aaKnown RBP14.26□□□□□ -0.13
HDAC6-229ENST00000486665 STAT6P42226 847 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 PSEN2P49810 448 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 NPEPPSP55786 919 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 MCM6Q14566 821 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 XKR3Q5GH77 459 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 PLA2G4FQ68DD2 849 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 IQUBQ8NA54 791 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 ATP8B4Q8TF62 1192 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 MYLIPQ8WY64 445 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 RAD54LQ92698 747 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 MTG1Q9BT17 334 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-229ENST00000486665 NRBP2Q9NSY0 501 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 DACT1Q9NYF0 836 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 ERAP1Q9NZ08 941 aa14.26□□□□□ -0.13
HDAC6-229ENST00000486665 EYA4O95677 639 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 PLA2G4BP0C869 781 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 SLC26A2P50443 739 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 ACLYP53396 1101 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 CHMP4BP1P59074 171 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 DHX8Q14562 1220 aaKnown RBP14.25□□□□□ -0.13
HDAC6-229ENST00000486665 MFSD10Q14728 455 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 GRAMD1CQ8IYS0 662 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 PCSK9Q8NBP7 692 aaKnown RBP14.25□□□□□ -0.13
HDAC6-229ENST00000486665 STAMQ92783 540 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 CEP89Q96ST8 783 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 MTRQ99707 1265 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 TSEN34Q9BSV6 310 aaKnown RBP14.25□□□□□ -0.13
HDAC6-229ENST00000486665 NIFKQ9BYG3 293 aaKnown RBP14.25□□□□□ -0.13
HDAC6-229ENST00000486665 ANKEF1Q9NU02 776 aa14.25□□□□□ -0.13
HDAC6-229ENST00000486665 SEPT9Q9UHD8 586 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-229ENST00000486665 DBR1Q9UK59 544 aaKnown RBP14.25□□□□□ -0.13
HDAC6-229ENST00000486665 GRIN2DO15399 1336 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 ZBTB42B2RXF5 422 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 PQBP1O60828 265 aaKnown RBP14.24□□□□□ -0.13
HDAC6-229ENST00000486665 SSBP05455 408 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC6-229ENST00000486665 CLTBP09497 229 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 SLFN14P0C7P3 912 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 RARRES1P49788 294 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 SLC12A3P55017 1021 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms