RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 BSDC1Q9NW68 430 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-208ENST00000486641 SUCLA2Q9P2R7 463 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-208ENST00000486641 TRMT112Q9UI30 125 aaKnown RBP11.56□□□□□ -0.56
CCDC171-208ENST00000486641 NAGPAQ9UK23 515 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 DBR1Q9UK59 544 aaKnown RBP11.56□□□□□ -0.56
CCDC171-208ENST00000486641 PDE8AO60658 829 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 SUN1O94901 812 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 RTN3O95197 1032 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-208ENST00000486641 FKBP3Q00688 224 aaKnown RBP11.55□□□□□ -0.56
CCDC171-208ENST00000486641 CHRNA2Q15822 529 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 ADAT2Q7Z6V5 191 aaKnown RBP11.55□□□□□ -0.56
CCDC171-208ENST00000486641 NT5DC3Q86UY8 548 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 SLC17A8Q8NDX2 589 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 TBC1D16Q8TBP0 767 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 GLG1Q92896 1179 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 SEMA4AQ9H3S1 761 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 PIDD1Q9HB75 910 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 RIC8AQ9NPQ8 531 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 IRAK4Q9NWZ3 460 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 ZMYND8Q9ULU4 1186 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-208ENST00000486641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC171-208ENST00000486641 SNX24Q9Y343 169 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 MYH3P11055 1940 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 ACTN1P12814 892 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 DR1Q01658 176 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 ALKBH5Q6P6C2 394 aaKnown RBP11.55□□□□□ -0.56
CCDC171-208ENST00000486641 ZDHHC24Q6UX98 284 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 HEATR3Q7Z4Q2 680 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 DAGLBQ8NCG7 672 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 FBXO25Q8TCJ0 367 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 MGARPQ8TDB4 240 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 HES6Q96HZ4 224 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 PNMA5Q96PV4 448 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 BRIP1Q9BX63 1249 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 DAAM1Q9Y4D1 1078 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC171-208ENST00000486641 TRPM3Q9HCF6 1732 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-208ENST00000486641 RPTORQ8N122 1335 aa11.55□□□□□ -0.56
CCDC171-208ENST00000486641 COL22A1Q8NFW1 1626 aaPredicted RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 LRRD1A4D1F6 860 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 ERVV-2B6SEH9 535 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 HGSO14964 777 aaPredicted RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 HIP1RO75146 1068 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 GJB6O95452 261 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 SSR1P43307 286 aaKnown RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 MXRA7P84157 204 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 ROR2Q01974 943 aaKnown RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 SLC35G1Q2M3R5 365 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 ZCWPW2Q504Y3 356 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 TNFAIP8L3Q5GJ75 292 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 PROM2Q8N271 834 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 DYDC1Q8WWB3 177 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 LARP4BQ92615 738 aaKnown RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 UTP4Q969X6 686 aaKnown RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 ANKRD27Q96NW4 1050 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 SYT15Q9BQS2 421 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 RXFP1Q9HBX9 757 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 ERVK-5Q9HDB9 667 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 CNOT7Q9UIV1 285 aaKnown RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 WFS1O76024 890 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 PDHA1P08559 390 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 PCP11498 1178 aaKnown RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 TXKP42681 527 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 PTENP60484 403 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 AUHQ13825 339 aaKnown RBP11.54□□□□□ -0.56
CCDC171-208ENST00000486641 NUGGCQ68CJ6 796 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 EXOC3L1Q86VI1 746 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 TRIM59Q8IWR1 403 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 MYOCDQ8IZQ8 938 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 TEKT4Q8WW24 435 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 DDX12PQ92771 950 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 ITFG2Q969R8 447 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 RMDN2Q96LZ7 410 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 ANKIB1Q9P2G1 1089 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 PRKAG3Q9UGI9 489 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 ARL2BPQ9Y2Y0 163 aa11.54□□□□□ -0.56
CCDC171-208ENST00000486641 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
CCDC171-208ENST00000486641 FLOT1O75955 427 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 GCLCP48506 637 aaPredicted RBP11.53□□□□□ -0.56
CCDC171-208ENST00000486641 DIXDC1Q155Q3 683 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 KIAA1755Q5JYT7 1200 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 DCAF12L1Q5VU92 463 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 SPATA21Q7Z572 469 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 TTC7AQ9ULT0 858 aaPredicted RBP11.53□□□□□ -0.56
CCDC171-208ENST00000486641 RTCBQ9Y3I0 505 aaKnown RBP11.53□□□□□ -0.56
CCDC171-208ENST00000486641 CASZ1Q86V15 1759 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 RREB1Q92766 1687 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 GPR75-ASB3A0A0A6YYF3 556 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 RASGRF2O14827 1237 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 CYTH3O43739 400 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 CCNB1P14635 433 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 CREB1P16220 341 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 SLC9A1P19634 815 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 GBP1P32455 592 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 PCK1P35558 622 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 MGAT5Q09328 741 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 PSMD2Q13200 908 aa11.53□□□□□ -0.56
CCDC171-208ENST00000486641 PRPF4BQ13523 1007 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms