RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 TTLL6Q8N841 843 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 MAGEB10Q96LZ2 347 aaPredicted RBP5.62□□□□□ -1.51
CDC7-204ENST00000486509 SPATA25Q9BR10 227 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 SMURF1Q9HCE7 757 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 PARD6AQ9NPB6 346 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 LUC7LQ9NQ29 371 aaKnown RBP5.62□□□□□ -1.51
CDC7-204ENST00000486509 CATSPERZQ9NTU4 200 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 SRPK3Q9UPE1 567 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 COQ6Q9Y2Z9 468 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 RTEL1-TNFRSF6BF6WH68 1400 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 MIA2Q96PC5 1412 aa5.62□□□□□ -1.51
CDC7-204ENST00000486509 CDK12Q9NYV4 1490 aaPredicted RBP5.62□□□□□ -1.51
CDC7-204ENST00000486509 hCG_2014768A0A024R1R8 64 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 DNM2P50570 870 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 IGBP1P78318 339 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 ST5P78524 1137 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 LACTBP83111 547 aaPredicted RBP5.61□□□□□ -1.51
CDC7-204ENST00000486509 FNDC3BQ53EP0 1204 aaKnown RBP5.61□□□□□ -1.51
CDC7-204ENST00000486509 LCE4AQ5TA78 99 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 TMC5Q6UXY8 1006 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 JAZF1Q86VZ6 243 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 PTRH1Q86Y79 214 aaKnown RBP5.61□□□□□ -1.51
CDC7-204ENST00000486509 FEZF2Q8TBJ5 459 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 ZSWIM3Q96MP5 696 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 XYLT2Q9H1B5 865 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 ARHGAP35Q9NRY4 1499 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 NUB1Q9Y5A7 615 aa5.61□□□□□ -1.51
CDC7-204ENST00000486509 ROBO1Q9Y6N7 1651 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 GPATCH8Q9UKJ3 1502 aaKnown RBP5.6□□□□□ -1.51
CDC7-204ENST00000486509 OTOL1A6NHN0 477 aaPredicted RBP5.6□□□□□ -1.51
CDC7-204ENST00000486509 FAM90A27PA6NNH2 459 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 KCNK3O14649 394 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 KRT15P19012 456 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 HOXA5P20719 270 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 RPL13P26373 211 aaKnown RBP5.6□□□□□ -1.51
CDC7-204ENST00000486509 SARSP49591 514 aaKnown RBP5.6□□□□□ -1.51
CDC7-204ENST00000486509 CRY1Q16526 586 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 FAM47CQ5HY64 1035 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 FSTL4Q6MZW2 842 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 GGT6Q6P531 493 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 OVCH1Q7RTY7 1134 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 CISD2Q8N5K1 135 aaKnown RBP5.6□□□□□ -1.51
CDC7-204ENST00000486509 CELF4Q9BZC1 486 aaKnown RBP5.6□□□□□ -1.51
CDC7-204ENST00000486509 ZCCHC4Q9H5U6 513 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 NTMQ9P121 344 aa5.6□□□□□ -1.51
CDC7-204ENST00000486509 SLIT1O75093 1534 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 CAMSAP2Q08AD1 1489 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 SCAF11Q99590 1463 aaKnown RBP5.59□□□□□ -1.51
CDC7-204ENST00000486509 FGD6Q6ZV73 1430 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 CASKIN1Q8WXD9 1431 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 DHX29Q7Z478 1369 aaKnown RBP5.59□□□□□ -1.51
CDC7-204ENST00000486509 JCADQ9P266 1359 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.59□□□□□ -1.51
CDC7-204ENST00000486509 GSTA4O15217 222 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 DNAJC8O75937 253 aaPredicted RBP5.59□□□□□ -1.51
CDC7-204ENST00000486509 ASMTLO95671 621 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 PTPN1P18031 435 aaKnown RBP5.59□□□□□ -1.51
CDC7-204ENST00000486509 SDSP20132 328 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 KCNC1P48547 511 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 SEC23AQ15436 765 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 FIGNQ5HY92 759 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 BTBD8Q5XKL5 378 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 CD276Q5ZPR3 534 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 TTLL7Q6ZT98 887 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 ZNF761Q86XN6 746 aaPredicted RBP5.59□□□□□ -1.51
CDC7-204ENST00000486509 SP8Q8IXZ3 490 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 NLGN4XQ8N0W4 816 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 DTX3Q8N9I9 347 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 C20orf173Q96LM9 149 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 TMEM209Q96SK2 561 aa5.59□□□□□ -1.51
CDC7-204ENST00000486509 MRPL42Q9Y6G3 142 aaKnown RBP5.59□□□□□ -1.51
CDC7-204ENST00000486509 ABCC3O15438 1527 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 MAP3K1Q13233 1512 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 ARHGAP23Q9P227 1491 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 UBR1Q8IWV7 1749 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 A0A0G2JLL6 359 aaPredicted RBP5.58□□□□□ -1.52
CDC7-204ENST00000486509 C4BPAP04003 597 aaKnown RBP5.58□□□□□ -1.52
CDC7-204ENST00000486509 ZNF28P17035 718 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 IBSPP21815 317 aaPredicted RBP5.58□□□□□ -1.52
CDC7-204ENST00000486509 MLLT6P55198 1093 aaPredicted RBP5.58□□□□□ -1.52
CDC7-204ENST00000486509 PHF19Q5T6S3 580 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 HHIPL2Q6UWX4 724 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 IGSF22Q8N9C0 903 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 ADAMTS17Q8TE56 1095 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 CLIC6Q96NY7 704 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 METTL14Q9HCE5 456 aaKnown RBP5.58□□□□□ -1.52
CDC7-204ENST00000486509 KLHL42Q9P2K6 505 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 ATP23Q9Y6H3 246 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 MBD5Q9P267 1494 aa5.58□□□□□ -1.52
CDC7-204ENST00000486509 SPATA31A6Q5VVP1 1343 aa5.57□□□□□ -1.52
CDC7-204ENST00000486509 DDX3XO00571 662 aaKnown RBP eCLIP5.57□□□□□ -1.52
CDC7-204ENST00000486509 NOBOXO60393 691 aa5.57□□□□□ -1.52
CDC7-204ENST00000486509 CLASP2O75122 1294 aaKnown RBP5.57□□□□□ -1.52
CDC7-204ENST00000486509 RFPL3O75679 317 aa5.57□□□□□ -1.52
CDC7-204ENST00000486509 SASH1O94885 1247 aa5.57□□□□□ -1.52
CDC7-204ENST00000486509 COL6A1P12109 1028 aa5.57□□□□□ -1.52
CDC7-204ENST00000486509 ANAPC15P60006 121 aa5.57□□□□□ -1.52
CDC7-204ENST00000486509 PFKPQ01813 784 aa5.57□□□□□ -1.52
CDC7-204ENST00000486509 DBPQ10586 325 aaPredicted RBP5.57□□□□□ -1.52
CDC7-204ENST00000486509 PABPC4Q13310 644 aaKnown RBP eCLIP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms