RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 ATP4AP20648 1035 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 CD52P31358 61 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 LTBRP36941 435 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 PRR16Q569H4 304 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 MTHFD1LQ6UB35 978 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 ATP8B4Q8TF62 1192 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 CLP1Q92989 425 aaKnown RBP23.68■■□□□ 1.38
LMBR1-217ENST00000485985 TM6SF1Q9BZW5 370 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 LMAN2LQ9H0V9 348 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 PRKAG3Q9UGI9 489 aa23.68■■□□□ 1.38
LMBR1-217ENST00000485985 FNDC1Q4ZHG4 1894 aaPredicted RBP23.67■■□□□ 1.38
LMBR1-217ENST00000485985 ZBTB42B2RXF5 422 aa23.67■■□□□ 1.38
LMBR1-217ENST00000485985 RPLP2P05387 115 aaKnown RBP23.67■■□□□ 1.38
LMBR1-217ENST00000485985 CIITAP33076 1130 aa23.67■■□□□ 1.38
LMBR1-217ENST00000485985 ZP2Q05996 745 aa23.67■■□□□ 1.38
LMBR1-217ENST00000485985 CTC1Q2NKJ3 1217 aa23.67■■□□□ 1.38
LMBR1-217ENST00000485985 FAM160B1Q5W0V3 765 aa23.67■■□□□ 1.38
LMBR1-217ENST00000485985 BICD2Q8TD16 824 aa23.67■■□□□ 1.38
LMBR1-217ENST00000485985 ZNF689Q96CS4 500 aaPredicted RBP23.67■■□□□ 1.38
LMBR1-217ENST00000485985 ZNF302Q9NR11 478 aa23.67■■□□□ 1.38
LMBR1-217ENST00000485985 TRPV2Q9Y5S1 764 aa23.67■■□□□ 1.38
LMBR1-217ENST00000485985 IGSF9BQ9UPX0 1349 aa23.66■■□□□ 1.38
LMBR1-217ENST00000485985 SMIM35A0A1B0GVV1 85 aa23.66■■□□□ 1.38
LMBR1-217ENST00000485985 BTG3Q14201 252 aaPredicted RBP23.66■■□□□ 1.38
LMBR1-217ENST00000485985 IER5Q5VY09 327 aa23.66■■□□□ 1.38
LMBR1-217ENST00000485985 SWSAP1Q6NVH7 229 aa23.66■■□□□ 1.38
LMBR1-217ENST00000485985 TNPO1Q92973 898 aaKnown RBP23.66■■□□□ 1.38
LMBR1-217ENST00000485985 SH3GLB2Q9NR46 395 aa23.66■■□□□ 1.38
LMBR1-217ENST00000485985 TBC1D22BQ9NU19 505 aa23.66■■□□□ 1.38
LMBR1-217ENST00000485985 COL1A2P08123 1366 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 C19orf67A6NJJ6 358 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 DCXO43602 365 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 HBP1O60381 514 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 DGKIO75912 1065 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 KLRC1P26715 233 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 HYAL1Q12794 435 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 STK3Q13188 491 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 ZNF746Q6NUN9 644 aaPredicted RBP23.65■■□□□ 1.38
LMBR1-217ENST00000485985 MIS18BP1Q6P0N0 1132 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 PDXDC2PQ6P474 469 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 ADHFE1Q8IWW8 467 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 ZNF274Q96GC6 653 aaPredicted RBP23.65■■□□□ 1.38
LMBR1-217ENST00000485985 AIFM3Q96NN9 605 aa23.65■■□□□ 1.38
LMBR1-217ENST00000485985 KDM3AQ9Y4C1 1321 aa23.64■■□□□ 1.38
LMBR1-217ENST00000485985 PIEZO1Q92508 2521 aa23.64■■□□□ 1.38
LMBR1-217ENST00000485985 M0QZ92 97 aa23.64■■□□□ 1.37
LMBR1-217ENST00000485985 CSPP1Q1MSJ5 1256 aa23.64■■□□□ 1.37
LMBR1-217ENST00000485985 TRIM22Q8IYM9 498 aa23.64■■□□□ 1.37
LMBR1-217ENST00000485985 CELF4Q9BZC1 486 aaKnown RBP23.64■■□□□ 1.37
LMBR1-217ENST00000485985 MAFBQ9Y5Q3 323 aaPredicted RBP23.64■■□□□ 1.37
LMBR1-217ENST00000485985 SQORQ9Y6N5 450 aa23.64■■□□□ 1.37
LMBR1-217ENST00000485985 NLRP5P59047 1200 aa23.63■■□□□ 1.37
LMBR1-217ENST00000485985 KRT76Q01546 638 aa23.63■■□□□ 1.37
LMBR1-217ENST00000485985 DLX2Q07687 328 aaPredicted RBP23.63■■□□□ 1.37
LMBR1-217ENST00000485985 SSRP1Q08945 709 aaKnown RBP23.63■■□□□ 1.37
LMBR1-217ENST00000485985 NPY5RQ15761 445 aa23.63■■□□□ 1.37
LMBR1-217ENST00000485985 RTN4RL1Q86UN2 441 aaPredicted RBP23.63■■□□□ 1.37
LMBR1-217ENST00000485985 SMAP1Q8IYB5 467 aaPredicted RBP23.63■■□□□ 1.37
LMBR1-217ENST00000485985 PLVAPQ9BX97 442 aa23.63■■□□□ 1.37
LMBR1-217ENST00000485985 PLXNA4Q9HCM2 1894 aa23.63■■□□□ 1.37
LMBR1-217ENST00000485985 PADI3Q9ULW8 664 aa23.63■■□□□ 1.37
LMBR1-217ENST00000485985 MSH4O15457 936 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 C22orf31O95567 290 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 MMP1P03956 469 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 SMAD2Q15796 467 aaKnown RBP23.62■■□□□ 1.37
LMBR1-217ENST00000485985 KIAA0319LQ8IZA0 1049 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 CRIPAKQ8N1N5 446 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 GJA10Q969M2 543 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 ALG13Q9NP73 1137 aaKnown RBP23.62■■□□□ 1.37
LMBR1-217ENST00000485985 PDRG1Q9NUG6 133 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 PCDHA4Q9UN74 947 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 PLAGL2Q9UPG8 496 aa23.62■■□□□ 1.37
LMBR1-217ENST00000485985 M0R2N6 131 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 CPLX1O14810 134 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 DEXIO95424 95 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 PSAPP07602 524 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 PAK2Q13177 524 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 CAMK1Q14012 370 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 CLUL1Q15846 466 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 TMEM266Q2M3C6 531 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 ZNF484Q5JVG2 852 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 CKAP2LQ8IYA6 745 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 NME8Q8N427 588 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 TBCKQ8TEA7 893 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 TMEM40Q8WWA1 233 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 BBXQ8WY36 941 aaPredicted RBP23.61■■□□□ 1.37
LMBR1-217ENST00000485985 P2RX5Q93086 422 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 FTHL17Q9BXU8 183 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 TMX1Q9H3N1 280 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 CDHR5Q9HBB8 845 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 PPP4R2Q9NY27 417 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 PCDHA10Q9Y5I2 948 aa23.61■■□□□ 1.37
LMBR1-217ENST00000485985 MBTPS2O43462 519 aa23.6■■□□□ 1.37
LMBR1-217ENST00000485985 GTF2F1P35269 517 aaKnown RBP eCLIP23.6■■□□□ 1.371e-6■□□□□ 8.3
LMBR1-217ENST00000485985 IRS1P35568 1242 aa23.6■■□□□ 1.37
LMBR1-217ENST00000485985 TRMT1LQ7Z2T5 733 aaKnown RBP23.6■■□□□ 1.37
LMBR1-217ENST00000485985 CMTR2Q8IYT2 770 aaKnown RBP23.6■■□□□ 1.37
LMBR1-217ENST00000485985 DAGLBQ8NCG7 672 aa23.6■■□□□ 1.37
LMBR1-217ENST00000485985 IGFLR1Q9H665 355 aa23.6■■□□□ 1.37
LMBR1-217ENST00000485985 GABBR1Q9UBS5 961 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms