RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 ADAM17P78536 824 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 TBR1Q16650 682 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 ARHGAP44Q17R89 818 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 ZNF827Q17R98 1081 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 SLFN13Q68D06 897 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 CDCA2Q69YH5 1023 aaPredicted RBP5.84□□□□□ -1.47
VPS41-213ENST00000485955 CC2D1AQ6P1N0 951 aaPredicted RBP5.84□□□□□ -1.47
VPS41-213ENST00000485955 RTN4RL1Q86UN2 441 aaPredicted RBP5.84□□□□□ -1.47
VPS41-213ENST00000485955 CHST14Q8NCH0 376 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 CD248Q9HCU0 757 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 FANCLQ9NW38 375 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 ASB1Q9Y576 335 aa5.84□□□□□ -1.47
VPS41-213ENST00000485955 CUTAO60888 179 aa5.83□□□□□ -1.48
VPS41-213ENST00000485955 ETV4P43268 484 aa5.83□□□□□ -1.48
VPS41-213ENST00000485955 KIF11P52732 1056 aa5.83□□□□□ -1.48
VPS41-213ENST00000485955 EIF4HQ15056 248 aaKnown RBP5.83□□□□□ -1.48
VPS41-213ENST00000485955 DNERQ8NFT8 737 aa5.83□□□□□ -1.48
VPS41-213ENST00000485955 WWC2-AS2Q96NR7 200 aa5.83□□□□□ -1.48
VPS41-213ENST00000485955 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
VPS41-213ENST00000485955 MRPL42Q9Y6G3 142 aaKnown RBP5.83□□□□□ -1.48
VPS41-213ENST00000485955 CBX4O00257 560 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 ZNF20P17024 532 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 PTX3P26022 381 aaPredicted RBP5.82□□□□□ -1.48
VPS41-213ENST00000485955 MOGSQ13724 837 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 TCEA2Q15560 299 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 CFAP100Q494V2 611 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 TRIM68Q6AZZ1 485 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 OTOP2Q7RTS6 562 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 JAZF1Q86VZ6 243 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 CIR1Q86X95 450 aaPredicted RBP5.82□□□□□ -1.48
VPS41-213ENST00000485955 HOMER1Q86YM7 354 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 TTC9BQ8N6N2 239 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 NEIL1Q96FI4 390 aaPredicted RBP5.82□□□□□ -1.48
VPS41-213ENST00000485955 LRRC37BQ96QE4 947 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 LMF1Q96S06 567 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 MTFR1LQ9H019 292 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 KIAA1683Q9H0B3 1180 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 SEC61A2Q9H9S3 476 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 B4GALT6Q9UBX8 382 aa5.82□□□□□ -1.48
VPS41-213ENST00000485955 A0A0G2JNJ9 132 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 PATE3B3GLJ2 98 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 MATN2O00339 956 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 FOXS1O43638 330 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 HMGCRP04035 888 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 INSRRP14616 1297 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 ALDH6A1Q02252 535 aaKnown RBP5.81□□□□□ -1.48
VPS41-213ENST00000485955 CREB3L3Q68CJ9 461 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 TCTN3Q6NUS6 607 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 C16orf86Q6ZW13 317 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 UBE2R2Q712K3 238 aaPredicted RBP5.81□□□□□ -1.48
VPS41-213ENST00000485955 BCL6BQ8N143 479 aaPredicted RBP5.81□□□□□ -1.48
VPS41-213ENST00000485955 SYNPOQ8N3V7 929 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 CHST13Q8NET6 341 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 C1QTNF3Q9BXJ4 246 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 CABP5Q9NP86 173 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 INTS7Q9NVH2 962 aaKnown RBP5.81□□□□□ -1.48
VPS41-213ENST00000485955 MAGEC2Q9UBF1 373 aaPredicted RBP5.81□□□□□ -1.48
VPS41-213ENST00000485955 Q9UFV3 132 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 FBXO10Q9UK96 956 aa5.81□□□□□ -1.48
VPS41-213ENST00000485955 SLC9A1P19634 815 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 RGS3P49796 1198 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 STAT5BP51692 787 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 PCOLCEQ15113 449 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 CDSNQ15517 529 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 TMEM200BQ69YZ2 307 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 FILIP1Q7Z7B0 1213 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 TAX1BP1Q86VP1 789 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 IFNL2Q8IZJ0 200 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 KIAA1958Q8N8K9 716 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 WDR48Q8TAF3 677 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 Q8TCH9 128 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 APPBP2Q92624 585 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 SCYL1Q96KG9 808 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 GPR20Q99678 358 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 H2AFY2Q9P0M6 372 aaPredicted RBP5.8□□□□□ -1.48
VPS41-213ENST00000485955 MAGEL2Q9UJ55 1249 aa5.8□□□□□ -1.48
VPS41-213ENST00000485955 ZNF623O75123 536 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 ATP2A2P16615 1042 aaKnown RBP5.79□□□□□ -1.48
VPS41-213ENST00000485955 APEX1P27695 318 aaKnown RBP5.79□□□□□ -1.48
VPS41-213ENST00000485955 FLT3P36888 993 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 FNTBP49356 437 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 MRE11P49959 708 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 ANTXR2P58335 489 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 SLC6A3Q01959 620 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 ZXDCQ2QGD7 858 aaPredicted RBP5.79□□□□□ -1.48
VPS41-213ENST00000485955 ZMAT1Q5H9K5 638 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 GRAMD4Q6IC98 578 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 ZNF585AQ6P3V2 769 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 DBX2Q6ZNG2 339 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 LRRTM3Q86VH5 581 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 DHX37Q8IY37 1157 aaKnown RBP5.79□□□□□ -1.48
VPS41-213ENST00000485955 NXPE1Q8N323 547 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 CALML6Q8TD86 181 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 NINJ1Q92982 152 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 ELF4Q99607 663 aaPredicted RBP5.79□□□□□ -1.48
VPS41-213ENST00000485955 FOXB1Q99853 325 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 DPYSL5Q9BPU6 564 aa5.79□□□□□ -1.48
VPS41-213ENST00000485955 ACSS2Q9NR19 701 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms