RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 DHX38Q92620 1227 aaKnown RBP14.19□□□□□ -0.14
HDAC7-223ENST00000485796 NIFKQ9BYG3 293 aaKnown RBP14.19□□□□□ -0.14
HDAC7-223ENST00000485796 CCSER1Q9C0I3 900 aa14.19□□□□□ -0.14
HDAC7-223ENST00000485796 GOLPH3LQ9H4A5 285 aa14.19□□□□□ -0.14
HDAC7-223ENST00000485796 POLD4Q9HCU8 107 aa14.19□□□□□ -0.14
HDAC7-223ENST00000485796 NRBP2Q9NSY0 501 aa14.19□□□□□ -0.14
HDAC7-223ENST00000485796 BMP2KQ9NSY1 1161 aaPredicted RBP14.19□□□□□ -0.14
HDAC7-223ENST00000485796 BLOC1S4Q9NUP1 217 aa14.19□□□□□ -0.14
HDAC7-223ENST00000485796 STK24Q9Y6E0 443 aa14.19□□□□□ -0.14
HDAC7-223ENST00000485796 TRIP12Q14669 1992 aaPredicted RBP14.19□□□□□ -0.14
HDAC7-223ENST00000485796 A0A1B0GVL5 298 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 PRPF40AO75400 957 aaKnown RBP14.18□□□□□ -0.14
HDAC7-223ENST00000485796 CD4P01730 458 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 CYP2C9P11712 490 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 PLCG1P19174 1290 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-223ENST00000485796 NAALADL2Q58DX5 795 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 ZNF484Q5JVG2 852 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 C1orf53Q5VUE5 145 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 HAUS3Q68CZ6 603 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 ADALQ6DHV7 355 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 SH3RF1Q7Z6J0 888 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 PDILTQ8N807 584 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 RASSF8Q8NHQ8 419 aa14.18□□□□□ -0.14
HDAC7-223ENST00000485796 C22orf31O95567 290 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 KLRC1P26715 233 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 TXLNAP40222 546 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 RARRES1P49788 294 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 FAAP100Q0VG06 881 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 DRP2Q13474 957 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 PTGISQ16647 500 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 XKR9Q5GH70 373 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 MTHFD1LQ6UB35 978 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 ANKRD33Q7Z3H0 272 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 LRRC71Q8N4P6 559 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 TMEM87AQ8NBN3 555 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 CALML4Q96GE6 196 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 CDK5RAP3Q96JB5 506 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 FAM167AQ96KS9 214 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 CEP170P1Q96L14 293 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 NACC1Q96RE7 527 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 CYP26B1Q9NR63 512 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 FAM13BQ9NYF5 915 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 ALPK3Q96L96 1907 aa14.17□□□□□ -0.14
HDAC7-223ENST00000485796 NRCAMQ92823 1304 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 MBLAC1A4D2B0 266 aaPredicted RBP14.16□□□□□ -0.14
HDAC7-223ENST00000485796 GOLGA6L22H0YM25 854 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 PFKFB1P16118 471 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 CMA1P23946 247 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 PTPN11Q06124 597 aaPredicted RBP14.16□□□□□ -0.14
HDAC7-223ENST00000485796 DHX8Q14562 1220 aaKnown RBP14.16□□□□□ -0.14
HDAC7-223ENST00000485796 MCM6Q14566 821 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 TRIM71Q2Q1W2 868 aaKnown RBP14.16□□□□□ -0.14
HDAC7-223ENST00000485796 LINC01465Q8N7H1 131 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 FSIP1Q8NA03 581 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 BHMT2Q9H2M3 363 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 XPNPEP1Q9NQW7 623 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 ANKEF1Q9NU02 776 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 CCDC39Q9UFE4 941 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 HPSEQ9Y251 543 aa14.16□□□□□ -0.14
HDAC7-223ENST00000485796 UMODL1Q5DID0 1318 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 KDM3AQ9Y4C1 1321 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 COL1A2P08123 1366 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 IGKV6-21A0A0C4DH24 114 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 NPHP3-ACAD11A0A0J9YXS1 232 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 A0A1W2PQ27 194 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 A0A1W2PQ64 194 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 A0A1W2PQD8 194 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 TRIM43BA6NCK2 446 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 RRN3P2A6NIE6 340 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 DKC1O60832 514 aaKnown RBP eCLIP14.15□□□□□ -0.14
HDAC7-223ENST00000485796 EYA4O95677 639 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 PLA2G4BP0C869 781 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 XRCC6P12956 609 aaKnown RBP eCLIP14.15□□□□□ -0.14
HDAC7-223ENST00000485796 MUTP22033 750 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 ITGB8P26012 769 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 CLCN3P51790 818 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 NDUFA8P51970 172 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 E2F4Q16254 413 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 RRAGBQ5VZM2 374 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 MAEAQ7L5Y9 396 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 OTUD6AQ7L8S5 288 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 SERINC5Q86VE9 423 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 KIAA0319LQ8IZA0 1049 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 RAD54LQ92698 747 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 TRIM43Q96BQ3 446 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-223ENST00000485796 RUSC1Q9BVN2 902 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 OSBPL7Q9BZF2 842 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 FAM49AQ9H0Q0 323 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-223ENST00000485796 SUGCTQ9HAC7 445 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 PDLIM7Q9NR12 457 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 TUBE1Q9UJT0 475 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 DBR1Q9UK59 544 aaKnown RBP14.15□□□□□ -0.14
HDAC7-223ENST00000485796 DNM3Q9UQ16 869 aa14.15□□□□□ -0.14
HDAC7-223ENST00000485796 FAM237AA0A1B0GTK4 181 aa14.14□□□□□ -0.15
HDAC7-223ENST00000485796 POLR2DO15514 142 aaKnown RBP14.14□□□□□ -0.15
HDAC7-223ENST00000485796 SLC26A4O43511 780 aa14.14□□□□□ -0.15
HDAC7-223ENST00000485796 USO1O60763 962 aaKnown RBP14.14□□□□□ -0.15
HDAC7-223ENST00000485796 MAFO75444 373 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-223ENST00000485796 SSBP05455 408 aaKnown RBP eCLIP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms