RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 HIC1Q14526 733 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 STK38Q15208 465 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 TARBP2Q15633 366 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 XKR3Q5GH77 459 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 AXDND1Q5T1B0 1012 aaPredicted RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 PSRC1Q6PGN9 363 aaPredicted RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 CATSPER3Q86XQ3 398 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 KCTD17Q8N5Z5 321 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 KRI1Q8N9T8 703 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 BANK1Q8NDB2 785 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 ERMNQ8TAM6 284 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 LMBR1Q8WVP7 490 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 DYDC2Q96IM9 177 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 NIFKQ9BYG3 293 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 CCSER1Q9C0I3 900 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 ZSWIM4Q9H7M6 989 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 RGL1Q9NZL6 768 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 TFIP11Q9UBB9 837 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 HDAC6Q9UBN7 1215 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 NOD1Q9Y239 953 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 PPME1Q9Y570 386 aa10.44□□□□□ -0.74
SHROOM3-207ENST00000485780 KDM3AQ9Y4C1 1321 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 RRN3P2A6NIE6 340 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 PP2D1A8MPX8 630 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 ACRP10323 421 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 XRCC6P12956 609 aaKnown RBP eCLIP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 INSRRP14616 1297 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 CSF2RAP15509 400 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 MARK3P27448 753 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 CCL23P55773 120 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 SMAD3P84022 425 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 CEBPZQ03701 1054 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 GRIK4Q16099 956 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 TMEM119Q4V9L6 283 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 ZNF484Q5JVG2 852 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 MARCH8Q5T0T0 291 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 FAM109BQ6ICB4 259 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 GDF6Q6KF10 455 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 CLEC17AQ6ZS10 378 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 ANO5Q75V66 913 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 C7orf31Q8N865 590 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 TNPO1Q92973 898 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 CHAMP1Q96JM3 812 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 NOC4LQ9BVI4 516 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 SCAND2PQ9GZW5 306 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 CSRNP2Q9H175 543 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 IL23AQ9NPF7 189 aa10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 TRMT13Q9NUP7 481 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-207ENST00000485780 IGKV6-21A0A0C4DH24 114 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 C17orf102A2RUQ5 167 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 CUTAO60888 179 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 C22orf31O95567 290 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 CYP2C9P11712 490 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 CDC25AP30304 524 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 YWHABP31946 246 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 CYP4A11Q02928 519 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 PPFIA1Q13136 1202 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 CTTNQ14247 550 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 ECM1Q16610 540 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 FOXD4L6Q3SYB3 417 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 TMEM240Q5SV17 173 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 KRT79Q5XKE5 535 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 FOXD4L3Q6VB84 417 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 RPAINQ86UA6 219 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 SERINC5Q86VE9 423 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 RPUSD2Q8IZ73 545 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 LINC01465Q8N7H1 131 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 SNX29Q8TEQ0 813 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 PPP1R13LQ8WUF5 828 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 NT5C3AQ9H0P0 336 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 ANKEF1Q9NU02 776 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 MTMR10Q9NXD2 777 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 DBR1Q9UK59 544 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 PCDHA7Q9UN72 937 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 TRPC6Q9Y210 931 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 COL6A3P12111 3177 aa10.42□□□□□ -0.74
SHROOM3-207ENST00000485780 MYH11P35749 1972 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 UMODL1Q5DID0 1318 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 FAM237AA0A1B0GTK4 181 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 FGBP02675 491 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 GNAT1P11488 350 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 CCT6AP40227 531 aaKnown RBP10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 RARRES1P49788 294 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 PTK7Q13308 1070 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 GRB10Q13322 594 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 BFSP2Q13515 415 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 PTGISQ16647 500 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 TRIM71Q2Q1W2 868 aaKnown RBP10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 POTEGQ6S5H5 508 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 SHC4Q6S5L8 630 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 USP49Q70CQ1 688 aa10.41□□□□□ -0.74
SHROOM3-207ENST00000485780 ZNF365Q70YC5 407 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms