RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 CCDC148Q8NFR7 591 aa15.05■□□□□ -0
UBA3-210ENST00000485424 BICD2Q8TD16 824 aa15.05■□□□□ -0
UBA3-210ENST00000485424 PCYT2Q99447 389 aa15.05■□□□□ -0
UBA3-210ENST00000485424 ZNF577Q9BSK1 485 aa15.05■□□□□ -0
UBA3-210ENST00000485424 FTHL17Q9BXU8 183 aa15.05■□□□□ -0
UBA3-210ENST00000485424 AGO3Q9H9G7 860 aaKnown RBP15.05■□□□□ -0
UBA3-210ENST00000485424 ZNF302Q9NR11 478 aa15.05■□□□□ -0
UBA3-210ENST00000485424 PRKAG3Q9UGI9 489 aa15.05■□□□□ -0
UBA3-210ENST00000485424 PCDHA2Q9Y5H9 948 aa15.05■□□□□ -0
UBA3-210ENST00000485424 USP34Q70CQ2 3546 aa15.04■□□□□ -0
UBA3-210ENST00000485424 ARID2Q68CP9 1835 aa15.04■□□□□ -0
UBA3-210ENST00000485424 ESYT2A0FGR8 921 aa15.04■□□□□ -0
UBA3-210ENST00000485424 MEIS1O00470 390 aa15.04■□□□□ -0
UBA3-210ENST00000485424 DCXO43602 365 aa15.04■□□□□ -0
UBA3-210ENST00000485424 HBP1O60381 514 aa15.04■□□□□ -0
UBA3-210ENST00000485424 TBX10O75333 385 aa15.04■□□□□ -0
UBA3-210ENST00000485424 CSPG5O95196 566 aa15.04■□□□□ -0
UBA3-210ENST00000485424 STAG3L1P0CL83 205 aa15.04■□□□□ -0
UBA3-210ENST00000485424 CD52P31358 61 aa15.04■□□□□ -0
UBA3-210ENST00000485424 GTF2F1P35269 517 aaKnown RBP eCLIP15.04■□□□□ -0
UBA3-210ENST00000485424 DLX2Q07687 328 aaPredicted RBP15.04■□□□□ -0
UBA3-210ENST00000485424 HYAL1Q12794 435 aa15.04■□□□□ -0
UBA3-210ENST00000485424 ITGB3BPQ13352 177 aaPredicted RBP15.04■□□□□ -0
UBA3-210ENST00000485424 ODR4Q5SWX8 454 aa15.04■□□□□ -0
UBA3-210ENST00000485424 PDXDC2PQ6P474 469 aa15.04■□□□□ -0
UBA3-210ENST00000485424 ADHFE1Q8IWW8 467 aa15.04■□□□□ -0
UBA3-210ENST00000485424 NME8Q8N427 588 aa15.04■□□□□ -0
UBA3-210ENST00000485424 TRAPPC12Q8WVT3 735 aa15.04■□□□□ -0
UBA3-210ENST00000485424 FAM217BQ9NTX9 383 aaPredicted RBP15.04■□□□□ -0
UBA3-210ENST00000485424 LRFN2Q9ULH4 789 aa15.04■□□□□ -0
UBA3-210ENST00000485424 SAMM50Q9Y512 469 aa15.04■□□□□ -0
UBA3-210ENST00000485424 SNX14Q9Y5W7 946 aa15.04■□□□□ -0
UBA3-210ENST00000485424 SQORQ9Y6N5 450 aa15.04■□□□□ -0
UBA3-210ENST00000485424 COL1A2P08123 1366 aa15.03■□□□□ -0
UBA3-210ENST00000485424 SMIM35A0A1B0GVV1 85 aa15.03■□□□□ -0
UBA3-210ENST00000485424 IPO5O00410 1097 aaKnown RBP15.03■□□□□ -0
UBA3-210ENST00000485424 PRPF3O43395 683 aaKnown RBP15.03■□□□□ -0
UBA3-210ENST00000485424 NCK2O43639 380 aa15.03■□□□□ -0
UBA3-210ENST00000485424 IBSPP21815 317 aaPredicted RBP15.03■□□□□ -0
UBA3-210ENST00000485424 RPS6KB1P23443 525 aa15.03■□□□□ -0
UBA3-210ENST00000485424 KLRC1P26715 233 aa15.03■□□□□ -0
UBA3-210ENST00000485424 KRT76Q01546 638 aa15.03■□□□□ -0
UBA3-210ENST00000485424 CLUL1Q15846 466 aa15.03■□□□□ -0
UBA3-210ENST00000485424 MTHFD1LQ6UB35 978 aa15.03■□□□□ -0
UBA3-210ENST00000485424 CRIPAKQ8N1N5 446 aa15.03■□□□□ -0
UBA3-210ENST00000485424 PLVAPQ9BX97 442 aa15.03■□□□□ -0
UBA3-210ENST00000485424 SLC26A6Q9BXS9 759 aa15.03■□□□□ -0
UBA3-210ENST00000485424 CELF4Q9BZC1 486 aaKnown RBP15.03■□□□□ -0
UBA3-210ENST00000485424 ZMYND12Q9H0C1 365 aa15.03■□□□□ -0
UBA3-210ENST00000485424 ALG13Q9NP73 1137 aaKnown RBP15.03■□□□□ -0
UBA3-210ENST00000485424 TBC1D22BQ9NU19 505 aa15.03■□□□□ -0
UBA3-210ENST00000485424 GINS2Q9Y248 185 aa15.03■□□□□ -0
UBA3-210ENST00000485424 MRPL42Q9Y6G3 142 aaKnown RBP15.03■□□□□ -0
UBA3-210ENST00000485424 DENND4AQ7Z401 1863 aa15.03■□□□□ -0
UBA3-210ENST00000485424 C2orf16Q68DN1 1984 aa15.02■□□□□ -0
UBA3-210ENST00000485424 IGSF9BQ9UPX0 1349 aa15.02■□□□□ -0
UBA3-210ENST00000485424 MBTPS2O43462 519 aa15.02■□□□□ -0
UBA3-210ENST00000485424 ATG7O95352 703 aa15.02■□□□□ -0
UBA3-210ENST00000485424 CYP3A4P08684 503 aa15.02■□□□□ -0
UBA3-210ENST00000485424 NFX1Q12986 1120 aaKnown RBP15.02■□□□□ -0
UBA3-210ENST00000485424 CAMK1Q14012 370 aa15.02■□□□□ -0
UBA3-210ENST00000485424 SMAD2Q15796 467 aaKnown RBP15.02■□□□□ -0
UBA3-210ENST00000485424 SWSAP1Q6NVH7 229 aa15.02■□□□□ -0
UBA3-210ENST00000485424 TRMT1LQ7Z2T5 733 aaKnown RBP15.02■□□□□ -0
UBA3-210ENST00000485424 RTN4RL1Q86UN2 441 aaPredicted RBP15.02■□□□□ -0
UBA3-210ENST00000485424 TRIM22Q8IYM9 498 aa15.02■□□□□ -0
UBA3-210ENST00000485424 CMTR2Q8IYT2 770 aaKnown RBP15.02■□□□□ -0
UBA3-210ENST00000485424 P2RX5Q93086 422 aa15.02■□□□□ -0
UBA3-210ENST00000485424 PHKBQ93100 1093 aa15.02■□□□□ -0
UBA3-210ENST00000485424 UIMC1Q96RL1 719 aa15.02■□□□□ -0
UBA3-210ENST00000485424 RNF26Q9BY78 433 aaPredicted RBP15.02■□□□□ -0
UBA3-210ENST00000485424 NID2Q14112 1375 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 FAM86B1E9PN63 330 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 CPLX1O14810 134 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 LINC01565O15544 149 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 NEFLP07196 543 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 PSAPP07602 524 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 FAM86B2P0C5J1 330 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 DNAJB1P25685 340 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 IRS1P35568 1242 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 CCT2P78371 535 aaKnown RBP15.01□□□□□ -0.01
UBA3-210ENST00000485424 SMAD4Q13485 552 aaKnown RBP15.01□□□□□ -0.01
UBA3-210ENST00000485424 CSPP1Q1MSJ5 1256 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 PAN2Q504Q3 1202 aaKnown RBP15.01□□□□□ -0.01
UBA3-210ENST00000485424 PRR16Q569H4 304 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 ZNF484Q5JVG2 852 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 ABHD15Q6UXT9 468 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 NPAS4Q8IUM7 802 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 SMAP1Q8IYB5 467 aaPredicted RBP15.01□□□□□ -0.01
UBA3-210ENST00000485424 ATP8B4Q8TF62 1192 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 KCNB2Q92953 911 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 PLSCR2Q9NRY7 297 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 PADI3Q9ULW8 664 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 PLAGL2Q9UPG8 496 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 CEP131Q9UPN4 1083 aa15.01□□□□□ -0.01
UBA3-210ENST00000485424 TDRD15B5MCY1 1934 aaKnown RBP15□□□□□ -0.01
UBA3-210ENST00000485424 KDM3AQ9Y4C1 1321 aa15□□□□□ -0.01
UBA3-210ENST00000485424 IGKV6D-21A0A0A0MT36 114 aa15□□□□□ -0.01
UBA3-210ENST00000485424 DENND3A2RUS2 1198 aa15□□□□□ -0.01
UBA3-210ENST00000485424 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms