RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 THAP3Q8WTV1 239 aaPredicted RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 XRN2Q9H0D6 950 aaKnown RBP eCLIP6□□□□□ -1.45
CCDC39-205ENST00000485055 TMEM51Q9NW97 253 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 RABL2AQ9UBK7 228 aaPredicted RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 Q9Y3F1 56 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 TNKSO95271 1327 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 VGLL3A8MV65 326 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 ABLIM3O94929 683 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 INHAP05111 366 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 MTHFD1P11586 935 aaKnown RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 CYBAP13498 195 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 TYRP1P17643 537 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 COPAP53621 1224 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 ZNF792Q3KQV3 632 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 PERM1Q5SV97 790 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 C20orf194Q5TEA3 1177 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 CDCA2Q69YH5 1023 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 MICALL1Q8N3F8 863 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 FAM26EQ8N5C1 309 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 GIMAP8Q8ND71 665 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 UHMK1Q8TAS1 419 aaKnown RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 BAP1Q92560 729 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 NINJ1Q92982 152 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 CITED4Q96RK1 184 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 TXNRD2Q9NNW7 524 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 OSGEPQ9NPF4 335 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 KIAA1217Q5T5P2 1943 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 TNRC18O15417 2968 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 A0A1W2PRG0 241 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 H0Y3Z8 333 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 TNPO2O14787 897 aaKnown RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 SNHG28P0DPA3 235 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 KRT20P35900 424 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 CCDC129Q6ZRS4 1044 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 TRIM50Q86XT4 487 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 NKAPQ8N5F7 415 aaKnown RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 U2AF1L4Q8WU68 220 aaKnown RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 OSBP2Q969R2 916 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 ATP6V1E2Q96A05 226 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 SHDQ96IW2 340 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 CDK5RAP3Q96JB5 506 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 LRGUKQ96M69 825 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 SPAG5Q96R06 1193 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 TARS2Q9BW92 718 aaKnown RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 PUS7LQ9H0K6 701 aaKnown RBP5.99□□□□□ -1.45
CCDC39-205ENST00000485055 SLC5A4Q9NY91 659 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 FEM1BQ9UK73 627 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 TRHDEQ9UKU6 1024 aa5.99□□□□□ -1.45
CCDC39-205ENST00000485055 RAD50Q92878 1312 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 TRIM75PA6NK02 468 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 BOLA2-SMG1P6H3BVE0 249 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 HIP1O00291 1037 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 EN2P19622 333 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-205ENST00000485055 PSMA3P25788 255 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 SOX10P56693 466 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 PTPN14Q15678 1187 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 MZT2BQ6NZ67 158 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 CATIPQ7Z7H3 387 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 TBC1D1Q86TI0 1168 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-205ENST00000485055 FAM160B2Q86V87 743 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 CHST13Q8NET6 341 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 STON2Q8WXE9 905 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 GJA10Q969M2 543 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 IWS1Q96ST2 819 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 ANLNQ9NQW6 1124 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 BTBD7Q9P203 1132 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.98□□□□□ -1.45
CCDC39-205ENST00000485055 DNM1LO00429 736 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 CD4P01730 458 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 POLR3DP05423 398 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-205ENST00000485055 MX1P20591 662 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 SOX9P48436 509 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 TRIM29Q14134 588 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 ZC3H12BQ5HYM0 836 aaKnown RBP5.98□□□□□ -1.45
CCDC39-205ENST00000485055 SWSAP1Q6NVH7 229 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 PASD1Q8IV76 773 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 TRIB2Q92519 343 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 CHMP4CQ96CF2 233 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 BARD1Q99728 777 aaKnown RBP5.98□□□□□ -1.45
CCDC39-205ENST00000485055 SPATC1LQ9H0A9 340 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 TNKS2Q9H2K2 1166 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 EPB41L4AQ9HCS5 686 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-205ENST00000485055 IL1RAPL2Q9NP60 686 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 MTMR4Q9NYA4 1195 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 UBP1Q9NZI7 540 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 FBXO40Q9UH90 709 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 POLIQ9UNA4 740 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 PHF24Q9UPV7 400 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 TANC1Q9C0D5 1861 aa5.98□□□□□ -1.45
CCDC39-205ENST00000485055 ARIH2O95376 493 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 IL4RP24394 825 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 SOX5P35711 763 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 PDE1AP54750 535 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 SPOCD1Q6ZMY3 1216 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 STK11IPQ8N1F8 1099 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 ANKRD13CQ8N6S4 541 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 NKAIN3Q8N8D7 197 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 SMCR8Q8TEV9 937 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 DCAF4Q8WV16 495 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 GDF15Q99988 308 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms