RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ANO5Q75V66 913 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 CREBRFQ8IUR6 639 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 C17orf53Q8N3J3 647 aaPredicted RBP15.51■□□□□ 0.07
CLK3-204ENST00000483723 ATP6V0A1Q93050 837 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 EEF2KMTQ96G04 330 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 MPHOSPH6Q99547 160 aaKnown RBP15.51■□□□□ 0.07
CLK3-204ENST00000483723 PORCNQ9H237 461 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 GABBR1Q9UBS5 961 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 TELO2Q9Y4R8 837 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 SYNGAP1Q96PV0 1343 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 IGKV6D-21A0A0A0MT36 114 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 AKR1B15C9JRZ8 316 aaPredicted RBP15.51■□□□□ 0.07
CLK3-204ENST00000483723 NKRFO15226 690 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLK3-204ENST00000483723 PPP1R37O75864 691 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 SUPT20HL2P0C7V6 817 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 CCNA1P78396 465 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 TRIM14Q14142 442 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 MAN2A1Q16706 1144 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 VWA3BQ502W6 1294 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 CEP135Q66GS9 1140 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 SWSAP1Q6NVH7 229 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 MIS18BP1Q6P0N0 1132 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 OTUD6AQ7L8S5 288 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 PPFIBP1Q86W92 1011 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 PANX2Q96RD6 677 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 ERGIC2Q96RQ1 377 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 PTPN18Q99952 460 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 NOC4LQ9BVI4 516 aaKnown RBP15.51■□□□□ 0.07
CLK3-204ENST00000483723 PDLIM7Q9NR12 457 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 TYW1Q9NV66 732 aaKnown RBP15.51■□□□□ 0.07
CLK3-204ENST00000483723 BACH1O14867 736 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 TGFB1I1O43294 461 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 NRDCO43847 1150 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 OFD1O75665 1012 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 GCNT3O95395 438 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 GYPCP04921 128 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 PGK2P07205 417 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 TPM2P07951 284 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 PRKCSHP14314 528 aaPredicted RBP15.5■□□□□ 0.07
CLK3-204ENST00000483723 FECHP22830 423 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 NMT1P30419 496 aaKnown RBP15.5■□□□□ 0.07
CLK3-204ENST00000483723 ADKP55263 362 aaKnown RBP15.5■□□□□ 0.07
CLK3-204ENST00000483723 TBC1D8BQ0IIM8 1120 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 NEDD9Q14511 834 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 KCNV1Q6PIU1 500 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 FAM178BQ8IXR5 827 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 ABRAQ8N0Z2 381 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 CCDC51Q96ER9 411 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 ST6GALNAC4Q9H4F1 302 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 EFCC1Q9HA90 598 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 MAFBQ9Y5Q3 323 aaPredicted RBP15.5■□□□□ 0.07
CLK3-204ENST00000483723 IGSF9BQ9UPX0 1349 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 ARID2Q68CP9 1835 aa15.5■□□□□ 0.07
CLK3-204ENST00000483723 MYH9P35579 1960 aaKnown RBP15.49■□□□□ 0.07
CLK3-204ENST00000483723 CALUO43852 315 aaPredicted RBP15.49■□□□□ 0.07
CLK3-204ENST00000483723 STX10O60499 249 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 UBA1P22314 1058 aaKnown RBP15.49■□□□□ 0.07
CLK3-204ENST00000483723 GOLGA8FQ08AF8 430 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 GOLGA8DPQ0D2H9 430 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 ADAM9Q13443 819 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 XKR9Q5GH70 373 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 ODR4Q5SWX8 454 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 STXBP4Q6ZWJ1 553 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 CYFIP1Q7L576 1253 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 CCDC60Q8IWA6 550 aaPredicted RBP15.49■□□□□ 0.07
CLK3-204ENST00000483723 SMCR8Q8TEV9 937 aaPredicted RBP15.49■□□□□ 0.07
CLK3-204ENST00000483723 LARSQ9P2J5 1176 aaKnown RBP15.49■□□□□ 0.07
CLK3-204ENST00000483723 DDX41Q9UJV9 622 aaKnown RBP15.49■□□□□ 0.07
CLK3-204ENST00000483723 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
CLK3-204ENST00000483723 GSTTP1A0A1W2PQM5 241 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 TMEM150BA6NC51 233 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 RASSF10A6NK89 507 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 CETN3O15182 167 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 STRNO43815 780 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 FARP2O94887 1054 aaPredicted RBP15.48■□□□□ 0.07
CLK3-204ENST00000483723 PLS3P13797 630 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 NPEPPSP55786 919 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 MKRN3Q13064 507 aaKnown RBP15.48■□□□□ 0.07
CLK3-204ENST00000483723 ALCAMQ13740 583 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 ZNF792Q3KQV3 632 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 UTP14CQ5TAP6 766 aaKnown RBP15.48■□□□□ 0.07
CLK3-204ENST00000483723 TRIM59Q8IWR1 403 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 ZNF526Q8TF50 670 aaPredicted RBP15.48■□□□□ 0.07
CLK3-204ENST00000483723 NUP58Q9BVL2 599 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 NDST4Q9H3R1 872 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 RNF225M0QZC1 329 aaPredicted RBP15.48■□□□□ 0.07
CLK3-204ENST00000483723 USO1O60763 962 aaKnown RBP15.48■□□□□ 0.07
CLK3-204ENST00000483723 MFAP3LO75121 409 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 ATP4AP20648 1035 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 CASP14P31944 242 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 FXR1P51114 621 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLK3-204ENST00000483723 KCNA1Q09470 495 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 ZC2HC1CQ53FD0 456 aaPredicted RBP15.48■□□□□ 0.07
CLK3-204ENST00000483723 XKR3Q5GH77 459 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 FIGNQ5HY92 759 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 E4F1Q66K89 784 aaPredicted RBP15.48■□□□□ 0.07
CLK3-204ENST00000483723 PLA2G4FQ68DD2 849 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 CCDC62Q6P9F0 684 aa15.48■□□□□ 0.07
CLK3-204ENST00000483723 CNGA4Q8IV77 575 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms