RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
CCM2-215ENST00000482714 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
CCM2-215ENST00000482714 KCND2Q9NZV8 630 aa17.12■□□□□ 0.33
CCM2-215ENST00000482714 HPSEQ9Y251 543 aa17.12■□□□□ 0.33
CCM2-215ENST00000482714 MBLAC1A4D2B0 266 aaPredicted RBP17.11■□□□□ 0.33
CCM2-215ENST00000482714 GAS2O43903 313 aaKnown RBP17.11■□□□□ 0.33
CCM2-215ENST00000482714 DGAT1O75907 488 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 RFC5P40937 340 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 RARRES1P49788 294 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 PSMC6P62333 389 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 KARSQ15046 597 aaKnown RBP17.11■□□□□ 0.33
CCM2-215ENST00000482714 GRIK4Q16099 956 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 XKR9Q5GH70 373 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 POTEGQ6S5H5 508 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 SYT2Q8N9I0 419 aaPredicted RBP17.11■□□□□ 0.33
CCM2-215ENST00000482714 RETREG2Q8NC44 543 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 MRPS27Q92552 414 aaKnown RBP17.11■□□□□ 0.33
CCM2-215ENST00000482714 CCDC34Q96HJ3 373 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 CEP170P1Q96L14 293 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 CCDC43Q96MW1 224 aaKnown RBP17.11■□□□□ 0.33
CCM2-215ENST00000482714 MAGEF1Q9HAY2 307 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 SEPT9Q9UHD8 586 aaPredicted RBP17.11■□□□□ 0.33
CCM2-215ENST00000482714 PCDHA2Q9Y5H9 948 aa17.11■□□□□ 0.33
CCM2-215ENST00000482714 BRCA2P51587 3418 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 TLR3O15455 904 aaKnown RBP17.1■□□□□ 0.33
CCM2-215ENST00000482714 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
CCM2-215ENST00000482714 MAFO75444 373 aaPredicted RBP17.1■□□□□ 0.33
CCM2-215ENST00000482714 PLCG1P19174 1290 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 CDC42EP1Q00587 391 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
CCM2-215ENST00000482714 TAF2Q6P1X5 1199 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 NME8Q8N427 588 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 PIGOQ8TEQ8 1089 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 DIS3LQ8TF46 1054 aaKnown RBP17.1■□□□□ 0.33
CCM2-215ENST00000482714 CEP89Q96ST8 783 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 SETD4Q9NVD3 440 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 KCNG1Q9UIX4 513 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 WDR81Q562E7 1941 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 KAT6AQ92794 2004 aa17.1■□□□□ 0.33
CCM2-215ENST00000482714 A0A1B0GVL5 298 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 DCDC2CA8MYV0 355 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 ZBTB42B2RXF5 422 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 KLRC1P26715 233 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 TMOD1P28289 359 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 STAT6P42226 847 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 SYKP43405 635 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 AMPD3Q01432 767 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 MLLT1Q03111 559 aaPredicted RBP17.09■□□□□ 0.33
CCM2-215ENST00000482714 TBC1D8BQ0IIM8 1120 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 FAM47CQ5HY64 1035 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 RPAINQ86UA6 219 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 SLC7A3Q8WY07 619 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 RAD54LQ92698 747 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
CCM2-215ENST00000482714 DHX33Q9H6R0 707 aaKnown RBP17.09■□□□□ 0.33
CCM2-215ENST00000482714 IGKV6-21A0A0C4DH24 114 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 ARHGEF35A5YM69 484 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 E9PMD0 336 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 ZBTB39O15060 712 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 POLR2DO15514 142 aaKnown RBP17.08■□□□□ 0.32
CCM2-215ENST00000482714 PLA2G4BP0C869 781 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 PFKFB1P16118 471 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 DNM2P50570 870 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 CHMP4BP1P59074 171 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 E2F4Q16254 413 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 MTERF2Q49AM1 385 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 MARCH8Q5T0T0 291 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 KANK3Q6NY19 840 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 MTHFD1LQ6UB35 978 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 SV2BQ7L1I2 683 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 ELOA2Q8IYF1 753 aaPredicted RBP17.08■□□□□ 0.32
CCM2-215ENST00000482714 FSIP1Q8NA03 581 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 MCPH1Q8NEM0 835 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 LMBR1Q8WVP7 490 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 LARP4BQ92615 738 aaKnown RBP17.08■□□□□ 0.32
CCM2-215ENST00000482714 HTATIP2Q9BUP3 242 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 PANK2Q9BZ23 570 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 BHMT2Q9H2M3 363 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.32
CCM2-215ENST00000482714 BLOC1S4Q9NUP1 217 aa17.08■□□□□ 0.32
CCM2-215ENST00000482714 TNRC18O15417 2968 aaPredicted RBP17.08■□□□□ 0.32
CCM2-215ENST00000482714 CAND2O75155 1236 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 CD4P01730 458 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 CYP11B2P19099 503 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 NPEPPSP55786 919 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 PTK7Q13308 1070 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 PTGISQ16647 500 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 GDF6Q6KF10 455 aaPredicted RBP17.07■□□□□ 0.32
CCM2-215ENST00000482714 PADI6Q6TGC4 694 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 TRMT1LQ7Z2T5 733 aaKnown RBP17.07■□□□□ 0.32
CCM2-215ENST00000482714 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 PDILTQ8N807 584 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 TCP11Q8WWU5 503 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 TIGD1Q96MW7 591 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 TNMDQ9H2S6 317 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms