RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 OTUD6AQ7L8S5 288 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 METTL13Q8N6R0 699 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 SPRYD3Q8NCJ5 442 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 VWCEQ96DN2 955 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 RNPC3Q96LT9 517 aaKnown RBP23.43■■□□□ 1.34
SEC13-217ENST00000482647 RAB34Q9BZG1 259 aa23.43■■□□□ 1.34
SEC13-217ENST00000482647 TRIOBPQ9H2D6 2365 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 CXCL10P02778 98 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 ACTN1P12814 892 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 TMOD1P28289 359 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 RESTQ13127 1097 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 BECN1Q14457 450 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 GPNMBQ14956 572 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 MTERF2Q49AM1 385 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 KIAA0319LQ8IZA0 1049 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 HERVK_113Q902F9 699 aa23.42■■□□□ 1.34
SEC13-217ENST00000482647 MTIF3Q9H2K0 278 aaKnown RBP23.42■■□□□ 1.34
SEC13-217ENST00000482647 ZSCAN16Q9H4T2 348 aaPredicted RBP23.42■■□□□ 1.34
SEC13-217ENST00000482647 WRAP73Q9P2S5 460 aaPredicted RBP23.42■■□□□ 1.34
SEC13-217ENST00000482647 M0QZ92 97 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 BMP15O95972 392 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 CHRNA1P02708 482 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 YWHABP31946 246 aaKnown RBP23.41■■□□□ 1.34
SEC13-217ENST00000482647 MRPS6P82932 125 aaKnown RBP23.41■■□□□ 1.34
SEC13-217ENST00000482647 ATP2C1P98194 919 aaPredicted RBP23.41■■□□□ 1.34
SEC13-217ENST00000482647 TBC1D8BQ0IIM8 1120 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 MBTPS1Q14703 1052 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 OTOP2Q7RTS6 562 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 LRWD1Q9UFC0 647 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 PPME1Q9Y570 386 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 STK24Q9Y6E0 443 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 LAMA2P24043 3122 aaKnown RBP23.41■■□□□ 1.34
SEC13-217ENST00000482647 LAMA3Q16787 3333 aa23.41■■□□□ 1.34
SEC13-217ENST00000482647 KAT6AQ92794 2004 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 TRIP12Q14669 1992 aaPredicted RBP23.4■■□□□ 1.34
SEC13-217ENST00000482647 TMEM150BA6NC51 233 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 LYPLA2O95372 231 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 LRIT3Q3SXY7 679 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 EFCAB12Q6NXP0 572 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 CEP170P1Q96L14 293 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 POLR3CQ9BUI4 534 aaPredicted RBP23.4■■□□□ 1.34
SEC13-217ENST00000482647 SUGCTQ9HAC7 445 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 TUFT1Q9NNX1 390 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 CYP26B1Q9NR63 512 aa23.4■■□□□ 1.34
SEC13-217ENST00000482647 MGAT3Q09327 533 aa23.39■■□□□ 1.33
SEC13-217ENST00000482647 TMEM62Q0P6H9 643 aa23.39■■□□□ 1.33
SEC13-217ENST00000482647 ARL6IP4Q66PJ3 421 aaKnown RBP23.39■■□□□ 1.33
SEC13-217ENST00000482647 HAUS3Q68CZ6 603 aa23.39■■□□□ 1.33
SEC13-217ENST00000482647 PLA2G4FQ68DD2 849 aa23.39■■□□□ 1.33
SEC13-217ENST00000482647 EXOC8Q8IYI6 725 aa23.39■■□□□ 1.33
SEC13-217ENST00000482647 JPH2Q9BR39 696 aaPredicted RBP23.39■■□□□ 1.33
SEC13-217ENST00000482647 SH2D3AQ9BRG2 576 aa23.39■■□□□ 1.33
SEC13-217ENST00000482647 CDY2AQ9Y6F7 541 aa23.39■■□□□ 1.33
SEC13-217ENST00000482647 MYH9P35579 1960 aaKnown RBP23.38■■□□□ 1.33
SEC13-217ENST00000482647 MAFO75444 373 aaPredicted RBP23.38■■□□□ 1.33
SEC13-217ENST00000482647 SPATA31C1P0DKV0 1188 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 XRCC6P12956 609 aaKnown RBP eCLIP23.38■■□□□ 1.33
SEC13-217ENST00000482647 RPA1P27694 616 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 NPEPPSP55786 919 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 IL17AQ16552 155 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 RASIP1Q5U651 963 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 CNKSR3Q6P9H4 555 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 CATSPER3Q86XQ3 398 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 ZNF710Q8N1W2 664 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 IGSF22Q8N9C0 903 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 CEP89Q96ST8 783 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 MAP7D2Q96T17 732 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 CELF4Q9BZC1 486 aaKnown RBP23.38■■□□□ 1.33
SEC13-217ENST00000482647 ANKEF1Q9NU02 776 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 TRPV2Q9Y5S1 764 aa23.38■■□□□ 1.33
SEC13-217ENST00000482647 BAIAP3O94812 1187 aa23.37■■□□□ 1.33
SEC13-217ENST00000482647 DNM2P50570 870 aa23.37■■□□□ 1.33
SEC13-217ENST00000482647 SF3A1Q15459 793 aaKnown RBP23.37■■□□□ 1.33
SEC13-217ENST00000482647 PLEKHG4Q58EX7 1191 aa23.37■■□□□ 1.33
SEC13-217ENST00000482647 XKR9Q5GH70 373 aa23.37■■□□□ 1.33
SEC13-217ENST00000482647 LRRC71Q8N4P6 559 aa23.37■■□□□ 1.33
SEC13-217ENST00000482647 SLC7A3Q8WY07 619 aa23.37■■□□□ 1.33
SEC13-217ENST00000482647 SEPT8Q92599 483 aa23.37■■□□□ 1.33
SEC13-217ENST00000482647 NACC1Q96RE7 527 aa23.37■■□□□ 1.33
SEC13-217ENST00000482647 IGKV6-21A0A0C4DH24 114 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 ZBBXA8MT70 800 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 ZBTB39O15060 712 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 MED24O75448 989 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 MUTP22033 750 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 RFC5P40937 340 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 CLCN3P51790 818 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 IKBKEQ14164 716 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 KRT79Q5XKE5 535 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 LINC01465Q8N7H1 131 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 USP38Q8NB14 1042 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 CCDC43Q96MW1 224 aaKnown RBP23.36■■□□□ 1.33
SEC13-217ENST00000482647 CXXC1Q9P0U4 656 aaPredicted RBP23.36■■□□□ 1.33
SEC13-217ENST00000482647 AKT3Q9Y243 479 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 SLC4A7Q9Y6M7 1214 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 SQORQ9Y6N5 450 aa23.36■■□□□ 1.33
SEC13-217ENST00000482647 KDM3AQ9Y4C1 1321 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 ABHD14A-ACY1A0A1B0GW23 586 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 VWA3AA6NCI4 1184 aa23.35■■□□□ 1.33
SEC13-217ENST00000482647 ZSCAN22P10073 491 aaPredicted RBP23.35■■□□□ 1.33
SEC13-217ENST00000482647 GHRP10912 638 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms