RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 YBX2Q9Y2T7 364 aaKnown RBP4.94□□□□□ -1.62
VPS41-212ENST00000482217 CCDC66A2RUB6 948 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 VSTM5A8MXK1 200 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 APAF1O14727 1248 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 ORC4O43929 436 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 MAFKO60675 156 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 RPN1P04843 607 aaKnown RBP4.93□□□□□ -1.62
VPS41-212ENST00000482217 SRGAP2CP0DJJ0 459 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 TRIM27P14373 513 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 ADD2P35612 726 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 TSPAN7P41732 249 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 ERVFRD-1P60508 538 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 LACTBP83111 547 aaPredicted RBP4.93□□□□□ -1.62
VPS41-212ENST00000482217 KIR3DS1Q14943 382 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 NR1I3Q14994 352 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 SEPT2Q15019 361 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 TAF11Q15544 211 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 CRY1Q16526 586 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 HABP4Q5JVS0 413 aaKnown RBP4.93□□□□□ -1.62
VPS41-212ENST00000482217 FAM102BQ5T8I3 360 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 LMBRD2Q68DH5 695 aaPredicted RBP4.93□□□□□ -1.62
VPS41-212ENST00000482217 BICRALQ6AI39 1079 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 CYP4F22Q6NT55 531 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 MMS22LQ6ZRQ5 1243 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 OTOP3Q7RTS5 596 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 RPAINQ86UA6 219 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 RASSF3Q86WH2 238 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 DCP2Q8IU60 420 aaKnown RBP4.93□□□□□ -1.62
VPS41-212ENST00000482217 IRF2BP1Q8IU81 584 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 MAGEB6Q8N7X4 407 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 IGSF22Q8N9C0 903 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 FBXO15Q8NCQ5 510 aaPredicted RBP4.93□□□□□ -1.62
VPS41-212ENST00000482217 HOOK2Q96ED9 719 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 JAM3Q9BX67 310 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 PCGF6Q9BYE7 350 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 MTFR1LQ9H019 292 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 RNF32Q9H0A6 362 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 SLC6A17Q9H1V8 727 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 EPB41L4BQ9H329 900 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 RIC8AQ9NPQ8 531 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 CATSPERZQ9NTU4 200 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 OBP2AQ9NY56 170 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 IP6K2Q9UHH9 426 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 USP25Q9UHP3 1055 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 FBXO2Q9UK22 296 aaPredicted RBP4.93□□□□□ -1.62
VPS41-212ENST00000482217 NUDT5Q9UKK9 219 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 ACAD8Q9UKU7 415 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 COQ6Q9Y2Z9 468 aa4.93□□□□□ -1.62
VPS41-212ENST00000482217 RASSF10A6NK89 507 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 CBX4O00257 560 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 KRIT1O00522 736 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 GLRX3O76003 335 aaKnown RBP4.92□□□□□ -1.62
VPS41-212ENST00000482217 TSPAN15O95858 294 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 NTRK1P04629 796 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 CYBBP04839 570 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 PYGMP11217 842 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 GNAT1P11488 350 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 GLULP15104 373 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 TACR1P25103 407 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 HOXC13P31276 330 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 DNM2P50570 870 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 MTA1Q13330 715 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 PIN1Q13526 163 aaPredicted RBP4.92□□□□□ -1.62
VPS41-212ENST00000482217 MTMR1Q13613 665 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 DHCR24Q15392 516 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 GPR19Q15760 415 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 ARHGAP44Q17R89 818 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 TMEM177Q53S58 311 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 EMC4Q5J8M3 183 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 CT47A1Q5JQC4 288 aaPredicted RBP4.92□□□□□ -1.62
VPS41-212ENST00000482217 PIK3R6Q5UE93 754 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 NXNQ6DKJ4 435 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 PAQR3Q6TCH7 311 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 PRR23BQ6ZRT6 265 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 LHFPL2Q6ZUX7 228 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 OVCH1Q7RTY7 1134 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 TTC30AQ86WT1 665 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 ENAHQ8N8S7 591 aaPredicted RBP4.92□□□□□ -1.62
VPS41-212ENST00000482217 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS41-212ENST00000482217 SEC14L1Q92503 715 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 CCDC47Q96A33 483 aaKnown RBP4.92□□□□□ -1.62
VPS41-212ENST00000482217 PEX11GQ96HA9 241 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 INTS4Q96HW7 963 aaKnown RBP4.92□□□□□ -1.62
VPS41-212ENST00000482217 STRBPQ96SI9 672 aaKnown RBP4.92□□□□□ -1.62
VPS41-212ENST00000482217 KCNJ15Q99712 375 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 CABP5Q9NP86 173 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 SLC6A20Q9NP91 592 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 FBLN5Q9UBX5 448 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 PCDHGB3Q9Y5G1 929 aa4.92□□□□□ -1.62
VPS41-212ENST00000482217 MORC2Q9Y6X9 1032 aaPredicted RBP4.92□□□□□ -1.62
VPS41-212ENST00000482217 DBX1A6NMT0 343 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 M0R2C6 588 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 HGSO14964 777 aaPredicted RBP4.91□□□□□ -1.62
VPS41-212ENST00000482217 KPNA6O60684 536 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 MPOP05164 745 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 DBHP09172 617 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 NCAM1P13591 858 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 CPEP16870 476 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 SCNN1BP51168 640 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms