RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 ITGB5P18084 799 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 CHMLP26374 656 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 NRIP1P48552 1158 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 GNAQP50148 359 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 GATMP50440 423 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 C6orf132Q5T0Z8 1188 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 ADGRD2Q7Z7M1 963 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 RBM23Q86U06 439 aaKnown RBP11.8□□□□□ -0.52
DDX39B-220ENST00000482195 CMTR2Q8IYT2 770 aaKnown RBP11.8□□□□□ -0.52
DDX39B-220ENST00000482195 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 IGDCC4Q8TDY8 1250 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 TRAPPC12Q8WVT3 735 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 ZNF689Q96CS4 500 aaPredicted RBP11.8□□□□□ -0.52
DDX39B-220ENST00000482195 LZTS2Q9BRK4 669 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 FTHL17Q9BXU8 183 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 AGO3Q9H9G7 860 aaKnown RBP11.8□□□□□ -0.52
DDX39B-220ENST00000482195 PLAGL2Q9UPG8 496 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 GINS2Q9Y248 185 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 RBM8AQ9Y5S9 174 aaKnown RBP11.8□□□□□ -0.52
DDX39B-220ENST00000482195 ZDBF2Q9HCK1 2354 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 KMT2EQ8IZD2 1858 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 TRIOO75962 3097 aa11.8□□□□□ -0.52
DDX39B-220ENST00000482195 MBLAC1A4D2B0 266 aaPredicted RBP11.79□□□□□ -0.52
DDX39B-220ENST00000482195 PPFIA3O75145 1194 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
DDX39B-220ENST00000482195 DNAJB1P25685 340 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 HERC4Q5GLZ8 1057 aaPredicted RBP11.79□□□□□ -0.52
DDX39B-220ENST00000482195 MARCH8Q5T0T0 291 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 SRBD1Q8N5C6 995 aaKnown RBP11.79□□□□□ -0.52
DDX39B-220ENST00000482195 KLHL23Q8NBE8 558 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 POF1BQ8WVV4 589 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 P2RX5Q93086 422 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 MAP3K14Q99558 947 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 SDF4Q9BRK5 362 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 KCNH6Q9H252 994 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 SLC9A2Q9UBY0 812 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 BARX2Q9UMQ3 279 aaPredicted RBP11.79□□□□□ -0.52
DDX39B-220ENST00000482195 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 PCDHGC5Q9Y5F6 944 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 UBIAD1Q9Y5Z9 338 aa11.79□□□□□ -0.52
DDX39B-220ENST00000482195 DDX39AO00148 427 aaKnown RBP11.78□□□□□ -0.52
DDX39B-220ENST00000482195 SH2B2O14492 632 aaPredicted RBP11.78□□□□□ -0.52
DDX39B-220ENST00000482195 SGSM2O43147 1006 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
DDX39B-220ENST00000482195 ADAM15Q13444 863 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 MICAL1Q8TDZ2 1067 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 TNPO1Q92973 898 aaKnown RBP11.78□□□□□ -0.52
DDX39B-220ENST00000482195 PGBD1Q96JS3 809 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 PPP1R16BQ96T49 567 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 JADE2Q9NQC1 790 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 PADI3Q9ULW8 664 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 WDR81Q562E7 1941 aa11.78□□□□□ -0.52
DDX39B-220ENST00000482195 DENND3A2RUS2 1198 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 TMEM221A6NGB7 291 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 TBKBP1A7MCY6 615 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 M0R296 226 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 BACH1O14867 736 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 CALM1P0DP23 149 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 CALM2P0DP24 149 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 CALM3P0DP25 149 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 MCM5P33992 734 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 ACTR2P61160 394 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 KRT76Q01546 638 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 CAMK1Q14012 370 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 NAALADL2Q58DX5 795 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
DDX39B-220ENST00000482195 SUGP1Q8IWZ8 645 aaKnown RBP11.77□□□□□ -0.53
DDX39B-220ENST00000482195 THNSL1Q8IYQ7 743 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 EFHBQ8N7U6 833 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 EDAQ92838 391 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 ZDHHC16Q969W1 377 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 PBXIP1Q96AQ6 731 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 PCYT2Q99447 389 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 LRRC2Q9BYS8 371 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 CELF4Q9BZC1 486 aaKnown RBP11.77□□□□□ -0.53
DDX39B-220ENST00000482195 USP15Q9Y4E8 981 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-220ENST00000482195 PCDHB7Q9Y5E2 793 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 PCDHB12Q9Y5F1 795 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 IGSF9BQ9UPX0 1349 aa11.77□□□□□ -0.53
DDX39B-220ENST00000482195 OATP04181 439 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
DDX39B-220ENST00000482195 SMARCA1P28370 1054 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 STAT5BP51692 787 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 NAPAP54920 295 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 PADI6Q6TGC4 694 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 MTHFD1LQ6UB35 978 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 RTN4RL1Q86UN2 441 aaPredicted RBP11.76□□□□□ -0.53
DDX39B-220ENST00000482195 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 TMTC2Q8N394 836 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
DDX39B-220ENST00000482195 SMRP1Q8NCR6 262 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms