RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 SIX5Q8N196 739 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 NCOA7Q8NI08 942 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 YTHDC1Q96MU7 727 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 ZNF215Q9UL58 517 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 PCDHB12Q9Y5F1 795 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 CDY2AQ9Y6F7 541 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 SGSM2O43147 1006 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 SCG2P13521 617 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 HOXB8P17481 243 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 ATXN1P54253 815 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 KANK3Q6NY19 840 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 XRRA1Q6P2D8 792 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 MB21D2Q8IYB1 491 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 FEZF2Q8TBJ5 459 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 RASGRP4Q8TDF6 673 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 IGDCC4Q8TDY8 1250 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 DNAJB3Q8WWF6 145 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 RUFY2Q8WXA3 655 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 ZBTB10Q96DT7 871 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 TCF25Q9BQ70 676 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 SENP7Q9BQF6 1050 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 RTP3Q9BQQ7 232 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 MYL10Q9BUA6 226 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 SPZ1Q9BXG8 430 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 LY9Q9HBG7 655 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 ENTPD7Q9NQZ7 604 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 FBXL21Q9UKT6 434 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 MYH7BA7E2Y1 1941 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 GPR179Q6PRD1 2367 aa10.83□□□□□ -0.68
SMARCE1-210ENST00000481231 PIK3CDO00329 1044 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 MEIS2O14770 477 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 DDAH1O94760 285 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 STAG3L1P0CL83 205 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 TPRNQ4KMQ1 711 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 RARS2Q5T160 578 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 CES5AQ6NT32 575 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 ZNF654Q8IZM8 581 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 ZDHHC14Q8IZN3 488 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 C12orf76Q8N812 135 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 COLGALT1Q8NBJ5 622 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 CTCFLQ8NI51 663 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 SMARCC2Q8TAQ2 1214 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 CUL5Q93034 780 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 RRP36Q96EU6 259 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 NECTIN4Q96NY8 510 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 MAP3K14Q99558 947 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 ADAM7Q9H2U9 754 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 HCFC2Q9Y5Z7 792 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 NRCAMQ92823 1304 aa10.82□□□□□ -0.68
SMARCE1-210ENST00000481231 DCDC2BA2VCK2 349 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 TBKBP1A7MCY6 615 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 ATP9AO75110 1047 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 PLEKHA8P1O95397 391 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 KCNA2P16389 499 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 KIF5BP33176 963 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 TCF7P36402 384 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 ITIH3Q06033 890 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 PPFIA1Q13136 1202 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 COL9A3Q14050 684 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 PDE12Q6L8Q7 609 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 TAF2Q6P1X5 1199 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 NLRX1Q86UT6 975 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 GIMAP8Q8ND71 665 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 CASP10Q92851 521 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 LZTS2Q9BRK4 669 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 FAM49AQ9H0Q0 323 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 AAASQ9NRG9 546 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 SEC63Q9UGP8 760 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 TUBE1Q9UJT0 475 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 DBR1Q9UK59 544 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 LRFN2Q9ULH4 789 aa10.81□□□□□ -0.68
SMARCE1-210ENST00000481231 GSTTP1A0A1W2PQM5 241 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 STK25O00506 426 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 PRC1O43663 620 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 NARSO43776 548 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 SP9P0CG40 484 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 ITGB5P18084 799 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 MARK3P27448 753 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 SMARCA1P28370 1054 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 PBX3P40426 434 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 MTHFRP42898 656 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 MRPS6P82932 125 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 TMEM62Q0P6H9 643 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 GRIK4Q16099 956 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 FAM102BQ5T8I3 360 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 KIAA0319Q5VV43 1072 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 ZC3H14Q6PJT7 736 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 RSPH3Q86UC2 560 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 CMTR1Q8N1G2 835 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 SRBD1Q8N5C6 995 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 SUMF1Q8NBK3 374 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 MRPS27Q92552 414 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 MAP4K1Q92918 833 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 GPRASP2Q96D09 838 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 CHAMP1Q96JM3 812 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 CDHR1Q96JP9 859 aa10.8□□□□□ -0.68
SMARCE1-210ENST00000481231 FTHL17Q9BXU8 183 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms