RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 GSTA5Q7RTV2 222 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 MANSC4A6NHS7 340 aaPredicted RBP20.97■□□□□ 0.95
CCM2-214ENST00000481194 FKBP1BP68106 108 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 LACTBP83111 547 aaPredicted RBP20.97■□□□□ 0.95
CCM2-214ENST00000481194 RPS6KA1Q15418 735 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 HVCN1Q96D96 273 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 MMS19Q96T76 1030 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 TMEM60Q9H2L4 133 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 MAGEB2O15479 319 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 ERO1AQ96HE7 468 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 CAPZA3Q96KX2 299 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 NUDT12Q9BQG2 462 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 PLA2G6O60733 806 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 RFX1P22670 979 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 KCNH4Q9UQ05 1017 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 DENND3A2RUS2 1198 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 ACTN4O43707 911 aaKnown RBP20.96■□□□□ 0.95
CCM2-214ENST00000481194 RBM10P98175 930 aaKnown RBP20.96■□□□□ 0.95
CCM2-214ENST00000481194 LAMC2Q13753 1193 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 MXD4Q14582 209 aaPredicted RBP20.96■□□□□ 0.95
CCM2-214ENST00000481194 BMS1Q14692 1282 aaKnown RBP20.96■□□□□ 0.95
CCM2-214ENST00000481194 CATSPER4Q7RTX7 472 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 PEX26Q7Z412 305 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 PARP2Q9UGN5 583 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 AGTPBP1Q9UPW5 1226 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 FCGRTP55899 365 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 CYFIP1Q7L576 1253 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 FAM217BQ9NTX9 383 aaPredicted RBP20.96■□□□□ 0.95
CCM2-214ENST00000481194 AMFRQ9UKV5 643 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 LTBP3Q9NS15 1303 aa20.96■□□□□ 0.95
CCM2-214ENST00000481194 MSH4O15457 936 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 CLDN3O15551 220 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 MED7O43513 233 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 SLC16A4O15374 487 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 GAS2O43903 313 aaKnown RBP20.95■□□□□ 0.94
CCM2-214ENST00000481194 ALDH1A1P00352 501 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 PTPRAP18433 802 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 SFI1A8K8P3 1242 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 EIF3DO15371 548 aaKnown RBP eCLIP20.95■□□□□ 0.94
CCM2-214ENST00000481194 ASAP2O43150 1006 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 HSF2BPO75031 334 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 SERPING1P05155 500 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 GCOM2Q9BZD3 368 aaPredicted RBP20.95■□□□□ 0.94
CCM2-214ENST00000481194 TOPORSQ9NS56 1045 aaPredicted RBP20.95■□□□□ 0.94
CCM2-214ENST00000481194 PCDHB4Q9Y5E5 795 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 MYPNQ86TC9 1320 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 FRMD5Q7Z6J6 570 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 PLEKHH3Q7Z736 793 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 ARFGAP3Q9NP61 516 aa20.95■□□□□ 0.94
CCM2-214ENST00000481194 VWA5AO00534 786 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 RGS2P41220 211 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 RNF169Q8NCN4 708 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 MTRF1LQ9UGC7 380 aaKnown RBP20.94■□□□□ 0.94
CCM2-214ENST00000481194 COBLO75128 1261 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 ABI1Q8IZP0 508 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 MAF1Q9H063 256 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 RRAGCQ9HB90 399 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 NSFP46459 744 aaKnown RBP20.94■□□□□ 0.94
CCM2-214ENST00000481194 ZBTB33Q86T24 672 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 METTL23Q86XA0 190 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 RGL1Q9NZL6 768 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 PLS3P13797 630 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 PPP2R5EQ16537 467 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 CCDC117Q8IWD4 279 aaPredicted RBP20.94■□□□□ 0.94
CCM2-214ENST00000481194 CEP72Q9P209 647 aa20.94■□□□□ 0.94
CCM2-214ENST00000481194 ADM5C9JUS6 153 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 ZNF500O60304 480 aaPredicted RBP20.93■□□□□ 0.94
CCM2-214ENST00000481194 ST3GAL1Q11201 340 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 CCDC155Q8N6L0 562 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 C17orf75Q9HAS0 396 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 PXMP2Q9NR77 195 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 PPME1Q9Y570 386 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 YDJCA8MPS7 323 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 VAV2P52735 878 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 PLCB3Q01970 1234 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 CFAP221Q4G0U5 840 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 CCDC77Q9BR77 488 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 LRFN2Q9ULH4 789 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 ZNF280AP59817 542 aaPredicted RBP20.93■□□□□ 0.94
CCM2-214ENST00000481194 CALR3Q96L12 384 aaKnown RBP20.93■□□□□ 0.94
CCM2-214ENST00000481194 PLIN4Q96Q06 1357 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 SPOUT1Q5T280 376 aaKnown RBP20.93■□□□□ 0.94
CCM2-214ENST00000481194 DHX40Q8IX18 779 aaKnown RBP20.93■□□□□ 0.94
CCM2-214ENST00000481194 ENGASEQ8NFI3 743 aa20.93■□□□□ 0.94
CCM2-214ENST00000481194 A0A087WWV3 80 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 TFAMQ00059 246 aaKnown RBP20.92■□□□□ 0.94
CCM2-214ENST00000481194 WHAMMP3Q1A5X7 153 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 HAUS6Q7Z4H7 955 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 ADSSL1Q8N142 457 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.94
CCM2-214ENST00000481194 MED10Q9BTT4 135 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 RAET1EQ8TD07 263 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 A0A1W2PQC6 194 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 SLC37A4O43826 429 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 CASP1P29466 404 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 TOB1P50616 345 aaPredicted RBP20.92■□□□□ 0.94
CCM2-214ENST00000481194 GABPAQ06546 454 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 BTNL9Q6UXG8 535 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 TTC39CQ8N584 583 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 SPATC1LQ9H0A9 340 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms