RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SOBPA7XYQ1 873 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 DCDC2CA8MYV0 355 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 FOXN3O00409 490 aaPredicted RBP9.21□□□□□ -0.94
LSM5-210ENST00000480956 DDX3XO00571 662 aaKnown RBP eCLIP9.21□□□□□ -0.942e-12■■■■□ 20.9
LSM5-210ENST00000480956 SLC3A2P08195 630 aaKnown RBP9.21□□□□□ -0.94
LSM5-210ENST00000480956 YBX3P16989 372 aaKnown RBP eCLIP9.21□□□□□ -0.946e-9■□□□□ 9
LSM5-210ENST00000480956 CTSOP43234 321 aaPredicted RBP9.21□□□□□ -0.94
LSM5-210ENST00000480956 GPR85P60893 370 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 PMS2P11Q13670 270 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 PDCD1Q15116 288 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 ZACNQ401N2 412 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 CEP57L1Q8IYX8 460 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 C2orf69Q8N8R5 385 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 OR8H1Q8NGG4 311 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 ZFPM2Q8WW38 1151 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 ERCC4Q92889 916 aaPredicted RBP9.21□□□□□ -0.94
LSM5-210ENST00000480956 TRIM47Q96LD4 638 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 ADPGKQ9BRR6 497 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 TSEN34Q9BSV6 310 aaKnown RBP9.21□□□□□ -0.94
LSM5-210ENST00000480956 GP6Q9HCN6 339 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 ITGB1BP2Q9UKP3 347 aa9.21□□□□□ -0.94
LSM5-210ENST00000480956 RRP7AQ9Y3A4 280 aaKnown RBP9.21□□□□□ -0.94
LSM5-210ENST00000480956 SOS2Q07890 1332 aaPredicted RBP9.2□□□□□ -0.94
LSM5-210ENST00000480956 A0A1W2PPH5 198 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 PGPEP1LA6NFU8 196 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 CPLX1O14810 134 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 SOAT2O75908 522 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 GHRHP01286 108 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 TPM2P07951 284 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 OSMP13725 252 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 RPL17P18621 184 aaKnown RBP9.2□□□□□ -0.94
LSM5-210ENST00000480956 ATP6V1E1P36543 226 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 HSPA7P48741 367 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 ALDH9A1P49189 494 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 SRSF2Q01130 221 aaKnown RBP9.2□□□□□ -0.94
LSM5-210ENST00000480956 PAK1Q13153 545 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 PLCL1Q15111 1095 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 PFKFB4Q16877 469 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 ARHGAP44Q17R89 818 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 RTL10Q7L3V2 364 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 OVCH1Q7RTY7 1134 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 IQCA1Q86XH1 822 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 CCDC33Q8N5R6 958 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 CCDC191Q8NCU4 936 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 LSM14AQ8ND56 463 aaKnown RBP9.2□□□□□ -0.94
LSM5-210ENST00000480956 PCDH19Q8TAB3 1148 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 NANOS1Q8WY41 292 aaKnown RBP9.2□□□□□ -0.94
LSM5-210ENST00000480956 HIC2Q96JB3 615 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 CGRRF1Q99675 332 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 ZDHHC5Q9C0B5 715 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 ABCG4Q9H172 646 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 MS4A5Q9H3V2 200 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 NOL6Q9H6R4 1146 aaKnown RBP9.2□□□□□ -0.94
LSM5-210ENST00000480956 PLSCR4Q9NRQ2 329 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 SYNRGQ9UMZ2 1314 aa9.2□□□□□ -0.94
LSM5-210ENST00000480956 KDM1AO60341 852 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ATP6V1B1P15313 513 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 TSHRP16473 764 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 IKBKEQ14164 716 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 KRT32Q14532 448 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 FAM47CQ5HY64 1035 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ISM2Q6H9L7 571 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 DENND5AQ6IQ26 1287 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 SLC30A6Q6NXT4 461 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ZNF610Q8N9Z0 462 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 SIMC1Q8NDZ2 872 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.19□□□□□ -0.947e-7■■■□□ 16.2
LSM5-210ENST00000480956 MGARPQ8TDB4 240 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 APIPQ96GX9 242 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 IWS1Q96ST2 819 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ALG1Q9BT22 464 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 RUBCNLQ9H714 662 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ZWILCHQ9H900 591 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 GPAMQ9HCL2 828 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 KRT82Q9NSB4 513 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 TUBD1Q9UJT1 453 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 H7C1D1 291 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 TADA3O75528 432 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 BMP2P12643 396 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 DNM2P50570 870 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ITGA8P53708 1063 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 MPEG1Q2M385 716 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 FBXO47Q5MNV8 452 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 RSPO2Q6UXX9 243 aaPredicted RBP9.19□□□□□ -0.94
LSM5-210ENST00000480956 HFE2Q6ZVN8 426 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 C12orf40Q86WS4 652 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ZMIZ2Q8NF64 920 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ZC3H10Q96K80 434 aaKnown RBP9.19□□□□□ -0.94
LSM5-210ENST00000480956 ACAP3Q96P50 834 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 SLC2A13Q96QE2 648 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 CNTD2Q9H8S5 307 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 ABCF3Q9NUQ8 709 aa9.19□□□□□ -0.94
LSM5-210ENST00000480956 PA2G4Q9UQ80 394 aaKnown RBP9.19□□□□□ -0.94
LSM5-210ENST00000480956 SHOXO15266 292 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 HTATSF1O43719 755 aaKnown RBP9.18□□□□□ -0.94
LSM5-210ENST00000480956 MTNR1BP49286 362 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 NR1H2P55055 460 aa9.18□□□□□ -0.94
LSM5-210ENST00000480956 GPLD1P80108 840 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms