RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 FAM184BQ9ULE4 1060 aa3.23□□□□□ -1.89
R3HDM1-214ENST00000480793 C1RP00736 705 aa3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 GNAT1P11488 350 aa3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 POU3F3P20264 500 aaPredicted RBP3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 SMAD3P84022 425 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 HDLBPQ00341 1268 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 SP5Q6BEB4 398 aaPredicted RBP3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 CDIP1Q9H305 208 aa3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 METTL5Q9NRN9 209 aaKnown RBP3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 CDC42EP3Q9UKI2 254 aa3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 TELO2Q9Y4R8 837 aa3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 ARHGEF17Q96PE2 2063 aaPredicted RBP3.22□□□□□ -1.89
R3HDM1-214ENST00000480793 ACOT7O00154 380 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 GIPRP48546 466 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 IL13RA1P78552 427 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 TAP1Q03518 808 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 DBPQ10586 325 aaPredicted RBP3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 NBPF6Q5VWK0 638 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 TRIM68Q6AZZ1 485 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 KCTD1Q719H9 257 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 GRASPQ7Z6J2 395 aaPredicted RBP3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 ZNF366Q8N895 744 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 NBPF4Q96M43 638 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 LRP2BPQ9P2M1 347 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 TESQ9UGI8 421 aaKnown RBP3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 TRPS1Q9UHF7 1281 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 DSEQ9UL01 958 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 FRMD4BQ9Y2L6 1034 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 INSL6Q9Y581 213 aa3.21□□□□□ -1.9
R3HDM1-214ENST00000480793 COL4A3Q01955 1670 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 XDHP47989 1333 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 GOLGA6L6A8MZA4 724 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 TBX1O43435 398 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 COL6A2P12110 1019 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 EPHA5P54756 1037 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 GFRA1P56159 465 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 PAK2Q13177 524 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 ELAVL1Q15717 326 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 ERCC6LQ2NKX8 1250 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 TIGD2Q4W5G0 525 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 PRR16Q569H4 304 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 TMEM145Q8NBT3 493 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 SUPT20HQ8NEM7 779 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 WDR48Q8TAF3 677 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 RABGGTAQ92696 567 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 ZNF428Q96B54 188 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 MRRFQ96E11 262 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 SPATA5L1Q9BVQ7 753 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 BCL11AQ9H165 835 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 GINM1Q9NU53 330 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 PPARGC1AQ9UBK2 798 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 NPFFR2Q9Y5X5 522 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 HS3ST4Q9Y661 456 aa3.2□□□□□ -1.9
R3HDM1-214ENST00000480793 COL11A2P13942 1736 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 A0A0G2JNJ9 132 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 SCAMP3O14828 347 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 GRK2P25098 689 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 GRK3P35626 688 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 USP14P54578 494 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 ELLP55199 621 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 NCAPHQ15003 741 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 SF1Q15637 639 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 ZNF227Q86WZ6 799 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 NT5DC4Q86YG4 428 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 C16orf92Q96LL3 132 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 PRDM13Q9H4Q3 707 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 GPR27Q9NS67 375 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 Q9UFV3 132 aa3.19□□□□□ -1.9
R3HDM1-214ENST00000480793 KLRG2A4D1S0 409 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 NKRFO15226 690 aaKnown RBP eCLIP3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 NR4A1P22736 598 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 PTGS1P23219 599 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 GJA8P48165 433 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 SOX9P48436 509 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 CASP7P55210 303 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 SV2CQ496J9 727 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 PLEKHG4Q58EX7 1191 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 TMEM200BQ69YZ2 307 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 DENND5AQ6IQ26 1287 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 Q6YL49 198 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 FAM169BQ8N8A8 192 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 RASGRP4Q8TDF6 673 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 KCNJ15Q99712 375 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 SLC29A3Q9BZD2 475 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 INCENPQ9NQS7 918 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 GALNT8Q9NY28 637 aa3.18□□□□□ -1.9
R3HDM1-214ENST00000480793 AVPR1BP47901 424 aa3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 RABGGTBP53611 331 aa3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 SAFB2Q14151 953 aaKnown RBP eCLIP3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 STILQ15468 1287 aa3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 HABP4Q5JVS0 413 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 SLC35F1Q5T1Q4 408 aa3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 BTBD8Q5XKL5 378 aa3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 BOLLQ8N9W6 283 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 ATXN2LQ8WWM7 1075 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 PGBD4Q96DM1 585 aa3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 C1orf159Q96HA4 380 aa3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 WNK4Q96J92 1243 aa3.17□□□□□ -1.9
R3HDM1-214ENST00000480793 SPATA32Q96LK8 384 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms