RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 TRIML1Q8N9V2 468 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 DDX12PQ92771 950 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 STAMQ92783 540 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 NRBP2Q9NSY0 501 aa18.75■□□□□ 0.59
SCAMP3-207ENST00000480219 COL1A2P08123 1366 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 A0A087WWV3 80 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 ARHGEF35A5YM69 484 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 HBP1O60381 514 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 UTP14CQ5TAP6 766 aaKnown RBP18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 FBXO46Q6PJ61 603 aaPredicted RBP18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 UNC13DQ70J99 1090 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 CKAP2LQ8IYA6 745 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 KAT2BQ92831 832 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 GLG1Q92896 1179 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 SMARCE1Q969G3 411 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 RUSC1Q9BVN2 902 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 SPC25Q9HBM1 224 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 PAK6Q9NQU5 681 aaPredicted RBP18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 CYP26B1Q9NR63 512 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 BMP2KQ9NSY1 1161 aaPredicted RBP18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 ZNF215Q9UL58 517 aaPredicted RBP18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 ODF2LQ9ULJ1 636 aa18.74■□□□□ 0.59
SCAMP3-207ENST00000480219 FRMPD3Q5JV73 1810 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 SYCE3A1L190 88 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 ZBTB42B2RXF5 422 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 H3BRB1 525 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 RHOBTB3O94955 611 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 CASP1P29466 404 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 CNGA1P29973 690 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 ZNF131P52739 623 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 LBX1P52954 281 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 GIT2Q14161 759 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 PADI6Q6TGC4 694 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 BLZF1Q9H2G9 400 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 TUT1Q9H6E5 874 aaKnown RBP18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 DHX33Q9H6R0 707 aaKnown RBP18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 XPNPEP3Q9NQH7 507 aa18.73■□□□□ 0.59
SCAMP3-207ENST00000480219 IGKV6-21A0A0C4DH24 114 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 TMEM150BA6NC51 233 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 MYADML2A6NDP7 307 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 DGAT1O75907 488 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 RPN1P04843 607 aaKnown RBP18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 NPEPPSP55786 919 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 PURAQ00577 322 aaKnown RBP18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 MORC3Q14149 939 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 XKR9Q5GH70 373 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 ZNF484Q5JVG2 852 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 PLA2G4FQ68DD2 849 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 SH3TC2Q8TF17 1288 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 ERCC4Q92889 916 aaPredicted RBP18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 CEP170P1Q96L14 293 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 GTPBP4Q9BZE4 634 aaKnown RBP18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 RNPEPQ9H4A4 650 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 RMND1Q9NWS8 449 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 SEPT9Q9UHD8 586 aaPredicted RBP18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 MAN1B1Q9UKM7 699 aa18.72■□□□□ 0.59
SCAMP3-207ENST00000480219 SSBP05455 408 aaKnown RBP eCLIP18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 ZNF286BP0CG31 522 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 HOXC8P31273 242 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 RFC5P40937 340 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 IRX5P78411 483 aaPredicted RBP18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 MAPK7Q13164 816 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 DHX8Q14562 1220 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 SLC9C1Q4G0N8 1177 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 COBLL1Q53SF7 1204 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 LRSAM1Q6UWE0 723 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 EXOC8Q8IYI6 725 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 DAW1Q8N136 415 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 ARMC5Q96C12 935 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 REEP2Q9BRK0 252 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 KATNAL1Q9BW62 490 aa18.71■□□□□ 0.59
SCAMP3-207ENST00000480219 SCN10AQ9Y5Y9 1956 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 GAS2O43903 313 aaKnown RBP18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 ZEB2O60315 1214 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 MAFO75444 373 aaPredicted RBP18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 PGK1P00558 417 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 C6orf222P0C671 652 aaPredicted RBP18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 BMP6P22004 513 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 RTP1P59025 263 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 ASIC1P78348 528 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 BEX3Q00994 111 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 KMT5BQ4FZB7 885 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 CCDC65Q8IXS2 484 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 MCPH1Q8NEM0 835 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 KCNN1Q92952 543 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 TSEN34Q9BSV6 310 aaKnown RBP18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 MTG1Q9BT17 334 aaPredicted RBP18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 GZF1Q9H116 711 aaPredicted RBP18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 PRDM10Q9NQV6 1147 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 XPNPEP1Q9NQW7 623 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 SEL1LQ9UBV2 794 aa18.7■□□□□ 0.58
SCAMP3-207ENST00000480219 GAP43P17677 238 aa18.69■□□□□ 0.58
SCAMP3-207ENST00000480219 MARK3P27448 753 aa18.69■□□□□ 0.58
SCAMP3-207ENST00000480219 PSEN2P49810 448 aa18.69■□□□□ 0.58
SCAMP3-207ENST00000480219 NLRP12P59046 1061 aa18.69■□□□□ 0.58
SCAMP3-207ENST00000480219 TYRO3Q06418 890 aa18.69■□□□□ 0.58
SCAMP3-207ENST00000480219 PSMD2Q13200 908 aa18.69■□□□□ 0.58
SCAMP3-207ENST00000480219 GNASQ5JWF2 1037 aa18.69■□□□□ 0.58
SCAMP3-207ENST00000480219 SASS6Q6UVJ0 657 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms