RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 C22orf31O95567 290 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 SYN1P17600 705 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 STK38Q15208 465 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 KCTD17Q8N5Z5 321 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 SNX29Q8TEQ0 813 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 CEP89Q96ST8 783 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 ANKEF1Q9NU02 776 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 CEP290O15078 2479 aa22.07■■□□□ 1.12
LIME1-205ENST00000480139 PPP6R2O75170 966 aa22.07■■□□□ 1.12
LIME1-205ENST00000480139 ITGB8P26012 769 aa22.07■■□□□ 1.12
LIME1-205ENST00000480139 KLRC1P26715 233 aa22.07■■□□□ 1.12
LIME1-205ENST00000480139 CCT6AP40227 531 aaKnown RBP22.07■■□□□ 1.12
LIME1-205ENST00000480139 DNM1Q05193 864 aaKnown RBP22.07■■□□□ 1.12
LIME1-205ENST00000480139 MFSD5Q6N075 450 aa22.07■■□□□ 1.12
LIME1-205ENST00000480139 TRMT1LQ7Z2T5 733 aaKnown RBP22.07■■□□□ 1.12
LIME1-205ENST00000480139 WNT8BQ93098 351 aa22.07■■□□□ 1.12
LIME1-205ENST00000480139 NACC1Q96RE7 527 aa22.07■■□□□ 1.12
LIME1-205ENST00000480139 MMTAG2Q9BU76 263 aaKnown RBP22.07■■□□□ 1.12
LIME1-205ENST00000480139 CYP26B1Q9NR63 512 aa22.07■■□□□ 1.12
LIME1-205ENST00000480139 TFIP11Q9UBB9 837 aaKnown RBP22.07■■□□□ 1.12
LIME1-205ENST00000480139 KDM3AQ9Y4C1 1321 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 PP2D1A8MPX8 630 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 SPTLC2O15270 562 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 CKBP12277 381 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 MARCKSP29966 332 aaPredicted RBP22.06■■□□□ 1.12
LIME1-205ENST00000480139 HYIQ5T013 277 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 RUFY4Q6ZNE9 571 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 RSPH3Q86UC2 560 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 EXOC8Q8IYI6 725 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 KRI1Q8N9T8 703 aaKnown RBP22.06■■□□□ 1.12
LIME1-205ENST00000480139 RETREG2Q8NC44 543 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 KCNG4Q8TDN1 519 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 PPP1R12CQ9BZL4 782 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 DBR1Q9UK59 544 aaKnown RBP22.06■■□□□ 1.12
LIME1-205ENST00000480139 UMODL1Q5DID0 1318 aa22.06■■□□□ 1.12
LIME1-205ENST00000480139 TMEM150BA6NC51 233 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 PARNO95453 639 aaKnown RBP22.05■■□□□ 1.12
LIME1-205ENST00000480139 SELPP16109 830 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 CYP2C18P33260 490 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 GRIN1Q05586 938 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 TBC1D8BQ0IIM8 1120 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 MTERF2Q49AM1 385 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 PLA2G4FQ68DD2 849 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 POTEGQ6S5H5 508 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 TMEM199Q8N511 208 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 LINC01465Q8N7H1 131 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 CEP170P1Q96L14 293 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 LBHD1Q9BQE6 289 aaPredicted RBP22.05■■□□□ 1.12
LIME1-205ENST00000480139 JPH2Q9BR39 696 aaPredicted RBP22.05■■□□□ 1.12
LIME1-205ENST00000480139 WNT8AQ9H1J5 351 aa22.05■■□□□ 1.12
LIME1-205ENST00000480139 EVPLQ92817 2033 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 IGKV6-21A0A0C4DH24 114 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 MAFO75444 373 aaPredicted RBP22.04■■□□□ 1.12
LIME1-205ENST00000480139 CDC25AP30304 524 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 RFC2P35250 354 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 THPOP40225 353 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 RFC5P40937 340 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 KRT85P78386 507 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 ECM1Q16610 540 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 FOXD4L6Q3SYB3 417 aaPredicted RBP22.04■■□□□ 1.12
LIME1-205ENST00000480139 FAM26DQ5JW98 314 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 FOXD4L3Q6VB84 417 aaPredicted RBP22.04■■□□□ 1.12
LIME1-205ENST00000480139 LRRC8DQ7L1W4 858 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 NME8Q8N427 588 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 BADQ92934 168 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 NT5C3AQ9H0P0 336 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 CSRNP2Q9H175 543 aa22.04■■□□□ 1.12
LIME1-205ENST00000480139 ZBTB39O15060 712 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 IQCF3P0C7M6 154 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 TMOD1P28289 359 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 UBA7P41226 1012 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 RARRES1P49788 294 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 NPEPPSP55786 919 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 XKR9Q5GH70 373 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 TRAF7Q6Q0C0 670 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 CABP7Q86V35 215 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 PIGOQ8TEQ8 1089 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 DNAJB3Q8WWF6 145 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 ZBTB10Q96DT7 871 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 CCSER1Q9C0I3 900 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 DHX33Q9H6R0 707 aaKnown RBP22.03■■□□□ 1.12
LIME1-205ENST00000480139 RCOR1Q9UKL0 485 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 KIAA1024Q9UPX6 916 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 SIP14410 1827 aa22.03■■□□□ 1.12
LIME1-205ENST00000480139 TCHHQ07283 1943 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 GAS2O43903 313 aaKnown RBP22.02■■□□□ 1.12
LIME1-205ENST00000480139 MAGEA10P43363 369 aaPredicted RBP22.02■■□□□ 1.12
LIME1-205ENST00000480139 FPGSQ05932 587 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 ZNF618Q5T7W0 954 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 EFCAB12Q6NXP0 572 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 KIAA0319LQ8IZA0 1049 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 ZNF710Q8N1W2 664 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 ZNF579Q8NAF0 562 aaKnown RBP22.02■■□□□ 1.12
LIME1-205ENST00000480139 SLC7A3Q8WY07 619 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 GDF15Q99988 308 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 SH2D3AQ9BRG2 576 aa22.02■■□□□ 1.12
LIME1-205ENST00000480139 DDX19AQ9NUU7 478 aaKnown RBP22.02■■□□□ 1.12
LIME1-205ENST00000480139 RSPH10B2B2RC85 870 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 DGAT1O75907 488 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 RSPH10BP0C881 870 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms