RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 PIK3CDO00329 1044 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 PER2O15055 1255 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 PPFIA3O75145 1194 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 REC8O95072 547 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 FOSP01100 380 aaPredicted RBP8.06□□□□□ -1.12
COL17A1-205ENST00000480127 SCG2P13521 617 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 ITGB5P18084 799 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 PSMA5P28066 241 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 KCNC3Q14003 757 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 PTPN21Q16825 1174 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 IER5Q5VY09 327 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 FAM160B1Q5W0V3 765 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 PPP1R18Q6NYC8 613 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 APOA5Q6Q788 366 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 BLOC1S2Q6QNY1 142 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 DHX32Q7L7V1 743 aaKnown RBP8.06□□□□□ -1.12
COL17A1-205ENST00000480127 PGBD1Q96JS3 809 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 PCYT2Q99447 389 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 FTHL17Q9BXU8 183 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 S1PR5Q9H228 398 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 TMX1Q9H3N1 280 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 TLE6Q9H808 572 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 C6orf50Q9HD87 102 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 PADI3Q9ULW8 664 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 TRPV2Q9Y5S1 764 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 C5orf42Q9H799 3197 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 TRIOO75962 3097 aa8.06□□□□□ -1.12
COL17A1-205ENST00000480127 IGSF9BQ9UPX0 1349 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 RRN3P2A6NIE6 340 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 PROB1E7EW31 1015 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 H0Y858 1186 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 hCG_1984214I3L0E3 225 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 CPLX1O14810 134 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 MAFGO15525 162 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 PDGFBP01127 241 aaPredicted RBP8.05□□□□□ -1.12
COL17A1-205ENST00000480127 RPLP2P05387 115 aaKnown RBP8.05□□□□□ -1.12
COL17A1-205ENST00000480127 STAG3L1P0CL83 205 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 INSRRP14616 1297 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 ERVFC1P60507 584 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 UBE3AQ05086 875 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 TMEM62Q0P6H9 643 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 PAK2Q13177 524 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 DUSP6Q16828 381 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 JAKMIP3Q5VZ66 844 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 WWC2Q6AWC2 1192 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 SYCE2Q6PIF2 218 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 CPLX2Q6PUV4 134 aaKnown RBP8.05□□□□□ -1.12
COL17A1-205ENST00000480127 TRIM22Q8IYM9 498 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 ZNF713Q8N859 430 aaPredicted RBP8.05□□□□□ -1.12
COL17A1-205ENST00000480127 BICD2Q8TD16 824 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 ATOH1Q92858 354 aaPredicted RBP8.05□□□□□ -1.12
COL17A1-205ENST00000480127 CELF4Q9BZC1 486 aaKnown RBP8.05□□□□□ -1.12
COL17A1-205ENST00000480127 IRF2BPLQ9H1B7 796 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 TLR9Q9NR96 1032 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 UBIAD1Q9Y5Z9 338 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 KAT6AQ92794 2004 aa8.05□□□□□ -1.12
COL17A1-205ENST00000480127 PLXNA4Q9HCM2 1894 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 FSCN2O14926 492 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 MARCH6O60337 910 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 MGEA5O60502 916 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 FGF18O76093 207 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 GNA11P29992 359 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 SARSP49591 514 aaKnown RBP8.04□□□□□ -1.12
COL17A1-205ENST00000480127 STAT5BP51692 787 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 NUBP1P53384 320 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 APOBRQ0VD83 1088 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 NFX1Q12986 1120 aaKnown RBP8.04□□□□□ -1.12
COL17A1-205ENST00000480127 AP3B2Q13367 1082 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 NECTIN1Q15223 517 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 TMEM266Q2M3C6 531 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 CEP55Q53EZ4 464 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 MCTP2Q6DN12 878 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 ANKRD54Q6NXT1 300 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 MIS18BP1Q6P0N0 1132 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 PDXDC2PQ6P474 469 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 TMEM184AQ6ZMB5 413 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 Q6ZUG5 572 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 ASCL5Q7RTU5 278 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 SGMS1Q86VZ5 419 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 SKAP1Q86WV1 359 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 PLA2G4DQ86XP0 818 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 REXO1Q8N1G1 1221 aaKnown RBP8.04□□□□□ -1.12
COL17A1-205ENST00000480127 METTL13Q8N6R0 699 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 CCDC148Q8NFR7 591 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 MICAL1Q8TDZ2 1067 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 TRAPPC12Q8WVT3 735 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 BRF1Q92994 677 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 RIPOR3Q96MK2 946 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 CDCA3Q99618 268 aaPredicted RBP8.04□□□□□ -1.12
COL17A1-205ENST00000480127 MXRA8Q9BRK3 442 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 ZNF577Q9BSK1 485 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 ANO3Q9BYT9 981 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 RIC8AQ9NPQ8 531 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 JADE2Q9NQC1 790 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 KCNH7Q9NS40 1196 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 HCSTQ9UBK5 93 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 PCDHB12Q9Y5F1 795 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 PCDHA2Q9Y5H9 948 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 PLXNA3P51805 1871 aa8.04□□□□□ -1.12
COL17A1-205ENST00000480127 CNTNAP5Q8WYK1 1306 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms