RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 TMPRSS15P98073 1019 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 ATP13A4Q4VNC1 1196 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 VWA3BQ502W6 1294 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 PRAMEF18Q5VWM3 479 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 LHFPL2Q6ZUX7 228 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 RTN4RL1Q86UN2 441 aaPredicted RBP6.14□□□□□ -1.43
SSR1-207ENST00000479485 PASD1Q8IV76 773 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 TTLL6Q8N841 843 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 ATL2Q8NHH9 583 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 WRNIP1Q96S55 665 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 TACO1Q9BSH4 297 aaKnown RBP6.14□□□□□ -1.43
SSR1-207ENST00000479485 MS4A5Q9H3V2 200 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 ZMAT4Q9H898 229 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 PCDH12Q9NPG4 1184 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 INCENPQ9NQS7 918 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 ARHGAP20Q9P2F6 1191 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 MCM8Q9UJA3 840 aa6.14□□□□□ -1.43
SSR1-207ENST00000479485 ZEB2O60315 1214 aa6.13□□□□□ -1.43
SSR1-207ENST00000479485 BRINP1O60477 761 aa6.13□□□□□ -1.43
SSR1-207ENST00000479485 CDKN1CP49918 316 aaPredicted RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 AFF3P51826 1226 aaKnown RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 SMAD3P84022 425 aaKnown RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 DLX2Q07687 328 aaPredicted RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 SMAD2Q15796 467 aaKnown RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 DDB1Q16531 1140 aa6.13□□□□□ -1.43
SSR1-207ENST00000479485 HDGFL2Q7Z4V5 671 aaPredicted RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 SAPCD2Q86UD0 394 aa6.13□□□□□ -1.43
SSR1-207ENST00000479485 DDX42Q86XP3 938 aaKnown RBP eCLIP6.13□□□□□ -1.43
SSR1-207ENST00000479485 ZCRB1Q8TBF4 217 aaKnown RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 DACT3Q96B18 629 aaPredicted RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 FOXRED1Q96CU9 486 aaPredicted RBP6.13□□□□□ -1.43
SSR1-207ENST00000479485 C16orf92Q96LL3 132 aa6.13□□□□□ -1.43
SSR1-207ENST00000479485 ATP8A1Q9Y2Q0 1164 aa6.13□□□□□ -1.43
SSR1-207ENST00000479485 UBA6A0AVT1 1052 aaPredicted RBP6.12□□□□□ -1.43
SSR1-207ENST00000479485 OVOL3O00110 214 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 FFAR3O14843 346 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 IL18BPO95998 194 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 PRLP01236 227 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 NCLP19338 710 aaKnown RBP6.12□□□□□ -1.43
SSR1-207ENST00000479485 EPHA7Q15375 998 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 LRSAM1Q6UWE0 723 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 ADGRG2Q8IZP9 1017 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 STPG3Q8N7X2 389 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 WDR66Q8TBY9 1149 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 ZNF526Q8TF50 670 aaPredicted RBP6.12□□□□□ -1.43
SSR1-207ENST00000479485 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
SSR1-207ENST00000479485 SLC5A5Q92911 643 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 AMNQ9BXJ7 453 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 KCND1Q9NSA2 647 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 SPATA6Q9NWH7 488 aaPredicted RBP6.12□□□□□ -1.43
SSR1-207ENST00000479485 GALNT8Q9NY28 637 aa6.12□□□□□ -1.43
SSR1-207ENST00000479485 A0A1B0GTL3 188 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 LCHNA4D1U4 455 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 GOLGA6L22H0YM25 854 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 GPR39O43194 453 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 EIF5BO60841 1220 aaKnown RBP6.11□□□□□ -1.43
SSR1-207ENST00000479485 FBXO21O94952 628 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 CD40P25942 277 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 PHC1P78364 1004 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 IL13RA1P78552 427 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 CAP1Q01518 475 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 ALDH6A1Q02252 535 aaKnown RBP6.11□□□□□ -1.43
SSR1-207ENST00000479485 TERF2Q15554 542 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 VMACQ2NL98 169 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 PRR31Q5SQ13 230 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 BROXQ5VW32 411 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 SPATS2Q86XZ4 545 aaKnown RBP6.11□□□□□ -1.43
SSR1-207ENST00000479485 ZZZ3Q8IYH5 903 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 C7orf31Q8N865 590 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 ZCCHC14Q8WYQ9 949 aaKnown RBP6.11□□□□□ -1.43
SSR1-207ENST00000479485 SCYL1Q96KG9 808 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 YTHDC1Q96MU7 727 aaKnown RBP6.11□□□□□ -1.43
SSR1-207ENST00000479485 KCNC2Q96PR1 638 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 FOXB1Q99853 325 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 NTMQ9P121 344 aa6.11□□□□□ -1.43
SSR1-207ENST00000479485 SH3D21A4FU49 640 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 ULK1O75385 1050 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 ADRB1P08588 477 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 COL6A1P12109 1028 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 ZNF28P17035 718 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 IBSPP21815 317 aaPredicted RBP6.1□□□□□ -1.43
SSR1-207ENST00000479485 RPL13P26373 211 aaKnown RBP6.1□□□□□ -1.43
SSR1-207ENST00000479485 LSP1P33241 339 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 ECE1P42892 770 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 GPR158Q5T848 1215 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 PRAMEF9Q5VWM5 478 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 TRMT10BQ6PF06 316 aaKnown RBP6.1□□□□□ -1.43
SSR1-207ENST00000479485 TTLL7Q6ZT98 887 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 NME9Q86XW9 330 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 PRPF38AQ8NAV1 312 aaKnown RBP6.1□□□□□ -1.43
SSR1-207ENST00000479485 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 CXorf38Q8TB03 319 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 COG1Q8WTW3 980 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 E2F7Q96AV8 911 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 BRINP2Q9C0B6 783 aa6.1□□□□□ -1.43
SSR1-207ENST00000479485 FANCIQ9NVI1 1328 aa6.09□□□□□ -1.43
SSR1-207ENST00000479485 hCG_2014768A0A024R1R8 64 aa6.09□□□□□ -1.43
SSR1-207ENST00000479485 KDM1AO60341 852 aa6.09□□□□□ -1.43
SSR1-207ENST00000479485 CYP7B1O75881 506 aa6.09□□□□□ -1.43
SSR1-207ENST00000479485 CDK11BP21127 795 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms